Gene : PGSC0003DMG400024154 S. tuberosum v4.03
Defline:  (1 of 1) K01704 - 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit (leuD) Genomic Order:  1742
Name:  ? PGSC0003DMG400024154 Secondary Identifier:  ? PAC:37450712
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum BRANCHED-CHAIN-AA-SYN-PWY Solanum tuberosum pathologic  
Stuberosum LEUSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400024154 0.5kb upstream 0.5kb upstream 1271 true ST4.03ch06: 44030837-44032107 Solanum tuberosum
PGSC0003DMG400024154 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 44031608-44032107 Solanum tuberosum
PGSC0003DMG400024154 0.5kb downstream 0.5kb downstream 1271 true ST4.03ch06: 44030337-44031607 Solanum tuberosum
PGSC0003DMG400024154 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 44030337-44030836 Solanum tuberosum
PGSC0003DMG400024154 1.0kb upstream 1.0kb upstream 1771 true ST4.03ch06: 44030837-44032607 Solanum tuberosum
PGSC0003DMG400024154 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 44031608-44032607 Solanum tuberosum
PGSC0003DMG400024154 1.0kb downstream 1.0kb downstream 1771 true ST4.03ch06: 44029837-44031607 Solanum tuberosum
PGSC0003DMG400024154 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 44029837-44030836 Solanum tuberosum
PGSC0003DMG400024154 2.0kb upstream 2.0kb upstream 2771 true ST4.03ch06: 44030837-44033607 Solanum tuberosum
PGSC0003DMG400024154 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 44031608-44033607 Solanum tuberosum
PGSC0003DMG400024154 2.0kb downstream 2.0kb downstream 2771 true ST4.03ch06: 44028837-44031607 Solanum tuberosum
PGSC0003DMG400024154 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 44028837-44030836 Solanum tuberosum
PGSC0003DMG400024154 5.0kb upstream 5.0kb upstream 5771 true ST4.03ch06: 44030837-44036607 Solanum tuberosum
PGSC0003DMG400024154 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 44031608-44036607 Solanum tuberosum
PGSC0003DMG400024154 5.0kb downstream 5.0kb downstream 5771 true ST4.03ch06: 44025837-44031607 Solanum tuberosum
PGSC0003DMG400024154 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 44025837-44030836 Solanum tuberosum
PGSC0003DMG400024154 10.0kb upstream 10.0kb upstream 10771 true ST4.03ch06: 44030837-44041607 Solanum tuberosum
PGSC0003DMG400024154 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 44031608-44041607 Solanum tuberosum
PGSC0003DMG400024154 10.0kb downstream 10.0kb downstream 10771 true ST4.03ch06: 44020837-44031607 Solanum tuberosum
PGSC0003DMG400024154 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 44020837-44030836 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
121475512 5263 Asterids View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain