Gene : PGSC0003DMG400017574 S. tuberosum v4.03
Defline:  (1 of 1) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1684
Name:  ? PGSC0003DMG400017574 Secondary Identifier:  ? PAC:37454430
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400017574 0.5kb upstream 0.5kb upstream 5732 true ST4.03ch06: 43379354-43385085 Solanum tuberosum
PGSC0003DMG400017574 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 43384586-43385085 Solanum tuberosum
PGSC0003DMG400017574 0.5kb downstream 0.5kb downstream 5732 true ST4.03ch06: 43378854-43384585 Solanum tuberosum
PGSC0003DMG400017574 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 43378854-43379353 Solanum tuberosum
PGSC0003DMG400017574 1.0kb upstream 1.0kb upstream 6232 true ST4.03ch06: 43379354-43385585 Solanum tuberosum
PGSC0003DMG400017574 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 43384586-43385585 Solanum tuberosum
PGSC0003DMG400017574 1.0kb downstream 1.0kb downstream 6232 true ST4.03ch06: 43378354-43384585 Solanum tuberosum
PGSC0003DMG400017574 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 43378354-43379353 Solanum tuberosum
PGSC0003DMG400017574 2.0kb upstream 2.0kb upstream 7232 true ST4.03ch06: 43379354-43386585 Solanum tuberosum
PGSC0003DMG400017574 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 43384586-43386585 Solanum tuberosum
PGSC0003DMG400017574 2.0kb downstream 2.0kb downstream 7232 true ST4.03ch06: 43377354-43384585 Solanum tuberosum
PGSC0003DMG400017574 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 43377354-43379353 Solanum tuberosum
PGSC0003DMG400017574 5.0kb upstream 5.0kb upstream 10232 true ST4.03ch06: 43379354-43389585 Solanum tuberosum
PGSC0003DMG400017574 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 43384586-43389585 Solanum tuberosum
PGSC0003DMG400017574 5.0kb downstream 5.0kb downstream 10232 true ST4.03ch06: 43374354-43384585 Solanum tuberosum
PGSC0003DMG400017574 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 43374354-43379353 Solanum tuberosum
PGSC0003DMG400017574 10.0kb upstream 10.0kb upstream 15232 true ST4.03ch06: 43379354-43394585 Solanum tuberosum
PGSC0003DMG400017574 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 43384586-43394585 Solanum tuberosum
PGSC0003DMG400017574 10.0kb downstream 10.0kb downstream 15232 true ST4.03ch06: 43369354-43384585 Solanum tuberosum
PGSC0003DMG400017574 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 43369354-43379353 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475455 5263 Asterids View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain