Gene : PGSC0003DMG402024041 S. tuberosum v4.03
Defline:  (1 of 1) PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  3273
Name:  ? PGSC0003DMG402024041 Secondary Identifier:  ? PAC:37451828
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ARO-PWY Solanum tuberosum pathologic  
Stuberosum PWY-6163 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG402024041 0.5kb upstream 0.5kb upstream 4897 true ST4.03ch06: 59259683-59264579 Solanum tuberosum
PGSC0003DMG402024041 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 59264080-59264579 Solanum tuberosum
PGSC0003DMG402024041 0.5kb downstream 0.5kb downstream 4897 true ST4.03ch06: 59259183-59264079 Solanum tuberosum
PGSC0003DMG402024041 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 59259183-59259682 Solanum tuberosum
PGSC0003DMG402024041 1.0kb upstream 1.0kb upstream 5397 true ST4.03ch06: 59259683-59265079 Solanum tuberosum
PGSC0003DMG402024041 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 59264080-59265079 Solanum tuberosum
PGSC0003DMG402024041 1.0kb downstream 1.0kb downstream 5397 true ST4.03ch06: 59258683-59264079 Solanum tuberosum
PGSC0003DMG402024041 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 59258683-59259682 Solanum tuberosum
PGSC0003DMG402024041 2.0kb upstream 2.0kb upstream 6397 true ST4.03ch06: 59259683-59266079 Solanum tuberosum
PGSC0003DMG402024041 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 59264080-59266079 Solanum tuberosum
PGSC0003DMG402024041 2.0kb downstream 2.0kb downstream 6397 true ST4.03ch06: 59257683-59264079 Solanum tuberosum
PGSC0003DMG402024041 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 59257683-59259682 Solanum tuberosum
PGSC0003DMG402024041 5.0kb upstream 5.0kb upstream 9397 true ST4.03ch06: 59259683-59269079 Solanum tuberosum
PGSC0003DMG402024041 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 59264080-59269079 Solanum tuberosum
PGSC0003DMG402024041 5.0kb downstream 5.0kb downstream 9397 true ST4.03ch06: 59254683-59264079 Solanum tuberosum
PGSC0003DMG402024041 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 59254683-59259682 Solanum tuberosum
PGSC0003DMG402024041 10.0kb upstream 10.0kb upstream 14397 true ST4.03ch06: 59259683-59274079 Solanum tuberosum
PGSC0003DMG402024041 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 59264080-59274079 Solanum tuberosum
PGSC0003DMG402024041 10.0kb downstream 10.0kb downstream 14397 true ST4.03ch06: 59249683-59264079 Solanum tuberosum
PGSC0003DMG402024041 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 59249683-59259682 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
121478325 5263 Asterids View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain