Gene : Thecc1EG046388 T. cacao v1.1
Defline:  (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD) Genomic Order:  17
Name:  ? Thecc1EG046388 Secondary Identifier:  ? PAC:27459545
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6126 Theobroma cacao pathologic  
Tcacao PWY-7219 Theobroma cacao pathologic  
Tcacao PWY-7229 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046388 0.5kb upstream 0.5kb upstream 3800 true cacao1chloroplast: 55522-59321 Theobroma cacao
Thecc1EG046388 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 58822-59321 Theobroma cacao
Thecc1EG046388 0.5kb downstream 0.5kb downstream 3800 true cacao1chloroplast: 55022-58821 Theobroma cacao
Thecc1EG046388 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 55022-55521 Theobroma cacao
Thecc1EG046388 1.0kb upstream 1.0kb upstream 4300 true cacao1chloroplast: 55522-59821 Theobroma cacao
Thecc1EG046388 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 58822-59821 Theobroma cacao
Thecc1EG046388 1.0kb downstream 1.0kb downstream 4300 true cacao1chloroplast: 54522-58821 Theobroma cacao
Thecc1EG046388 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 54522-55521 Theobroma cacao
Thecc1EG046388 2.0kb upstream 2.0kb upstream 5300 true cacao1chloroplast: 55522-60821 Theobroma cacao
Thecc1EG046388 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 58822-60821 Theobroma cacao
Thecc1EG046388 2.0kb downstream 2.0kb downstream 5300 true cacao1chloroplast: 53522-58821 Theobroma cacao
Thecc1EG046388 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 53522-55521 Theobroma cacao
Thecc1EG046388 5.0kb upstream 5.0kb upstream 8300 true cacao1chloroplast: 55522-63821 Theobroma cacao
Thecc1EG046388 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 58822-63821 Theobroma cacao
Thecc1EG046388 5.0kb downstream 5.0kb downstream 8300 true cacao1chloroplast: 50522-58821 Theobroma cacao
Thecc1EG046388 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 50522-55521 Theobroma cacao
Thecc1EG046388 10.0kb upstream 10.0kb upstream 13300 true cacao1chloroplast: 55522-68821 Theobroma cacao
Thecc1EG046388 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 58822-68821 Theobroma cacao
Thecc1EG046388 10.0kb downstream 10.0kb downstream 13300 true cacao1chloroplast: 45522-58821 Theobroma cacao
Thecc1EG046388 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 45522-55521 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838703 5264 Brassicales-Malvales View MSA
124322489 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain