Gene : Thecc1EG046390 T. cacao v1.1
Defline:  (1 of 1) K01963 - acetyl-CoA carboxylase carboxyl transferase subunit beta (accD) Genomic Order:  19
Name:  ? Thecc1EG046390 Secondary Identifier:  ? PAC:27459569
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1264 Theobroma cacao pathologic  
Tcacao PWY-4381 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-7388 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046390 0.5kb upstream 0.5kb upstream 4610 true cacao1chloroplast: 60386-64995 Theobroma cacao
Thecc1EG046390 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 60386-60885 Theobroma cacao
Thecc1EG046390 0.5kb downstream 0.5kb downstream 4610 true cacao1chloroplast: 60886-65495 Theobroma cacao
Thecc1EG046390 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 64996-65495 Theobroma cacao
Thecc1EG046390 1.0kb upstream 1.0kb upstream 5110 true cacao1chloroplast: 59886-64995 Theobroma cacao
Thecc1EG046390 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 59886-60885 Theobroma cacao
Thecc1EG046390 1.0kb downstream 1.0kb downstream 5110 true cacao1chloroplast: 60886-65995 Theobroma cacao
Thecc1EG046390 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 64996-65995 Theobroma cacao
Thecc1EG046390 2.0kb upstream 2.0kb upstream 6110 true cacao1chloroplast: 58886-64995 Theobroma cacao
Thecc1EG046390 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 58886-60885 Theobroma cacao
Thecc1EG046390 2.0kb downstream 2.0kb downstream 6110 true cacao1chloroplast: 60886-66995 Theobroma cacao
Thecc1EG046390 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 64996-66995 Theobroma cacao
Thecc1EG046390 5.0kb upstream 5.0kb upstream 9110 true cacao1chloroplast: 55886-64995 Theobroma cacao
Thecc1EG046390 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 55886-60885 Theobroma cacao
Thecc1EG046390 5.0kb downstream 5.0kb downstream 9110 true cacao1chloroplast: 60886-69995 Theobroma cacao
Thecc1EG046390 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 64996-69995 Theobroma cacao
Thecc1EG046390 10.0kb upstream 10.0kb upstream 14110 true cacao1chloroplast: 50886-64995 Theobroma cacao
Thecc1EG046390 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 50886-60885 Theobroma cacao
Thecc1EG046390 10.0kb downstream 10.0kb downstream 14110 true cacao1chloroplast: 60886-74995 Theobroma cacao
Thecc1EG046390 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 64996-74995 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832931 5264 Brassicales-Malvales View MSA
124321832 5266 SBM View MSA
124245266 5268 Malvidae View MSA
124050309 5270 Rosid View MSA
123748831 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain