Gene : Thecc1EG046386 T. cacao v1.1
Defline:  (1 of 1) K02986 - small subunit ribosomal protein S4 (RP-S4, rpsD) Genomic Order:  15
Name:  ? Thecc1EG046386 Secondary Identifier:  ? PAC:27459546
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046386 0.5kb upstream 0.5kb upstream 2349 true cacao1chloroplast: 47133-49481 Theobroma cacao
Thecc1EG046386 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 48982-49481 Theobroma cacao
Thecc1EG046386 0.5kb downstream 0.5kb downstream 2349 true cacao1chloroplast: 46633-48981 Theobroma cacao
Thecc1EG046386 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 46633-47132 Theobroma cacao
Thecc1EG046386 1.0kb upstream 1.0kb upstream 2849 true cacao1chloroplast: 47133-49981 Theobroma cacao
Thecc1EG046386 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 48982-49981 Theobroma cacao
Thecc1EG046386 1.0kb downstream 1.0kb downstream 2849 true cacao1chloroplast: 46133-48981 Theobroma cacao
Thecc1EG046386 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 46133-47132 Theobroma cacao
Thecc1EG046386 2.0kb upstream 2.0kb upstream 3849 true cacao1chloroplast: 47133-50981 Theobroma cacao
Thecc1EG046386 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 48982-50981 Theobroma cacao
Thecc1EG046386 2.0kb downstream 2.0kb downstream 3849 true cacao1chloroplast: 45133-48981 Theobroma cacao
Thecc1EG046386 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 45133-47132 Theobroma cacao
Thecc1EG046386 5.0kb upstream 5.0kb upstream 6849 true cacao1chloroplast: 47133-53981 Theobroma cacao
Thecc1EG046386 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 48982-53981 Theobroma cacao
Thecc1EG046386 5.0kb downstream 5.0kb downstream 6849 true cacao1chloroplast: 42133-48981 Theobroma cacao
Thecc1EG046386 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 42133-47132 Theobroma cacao
Thecc1EG046386 10.0kb upstream 10.0kb upstream 11849 true cacao1chloroplast: 47133-58981 Theobroma cacao
Thecc1EG046386 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 48982-58981 Theobroma cacao
Thecc1EG046386 10.0kb downstream 10.0kb downstream 11849 true cacao1chloroplast: 37133-48981 Theobroma cacao
Thecc1EG046386 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 37133-47132 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
123834981 5264 Brassicales-Malvales View MSA
124321984 5266 SBM View MSA
124245243 5268 Malvidae View MSA
124073492 5270 Rosid View MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain