Gene : Thecc1EG046403 T. cacao v1.1
Defline:  (1 of 1) K02982 - small subunit ribosomal protein S3 (RP-S3, rpsC) Genomic Order:  31
Name:  ? Thecc1EG046403 Secondary Identifier:  ? PAC:27459532
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046403 0.5kb upstream 0.5kb upstream 2356 true cacao1chloroplast: 85996-88351 Theobroma cacao
Thecc1EG046403 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 87852-88351 Theobroma cacao
Thecc1EG046403 0.5kb downstream 0.5kb downstream 2356 true cacao1chloroplast: 85496-87851 Theobroma cacao
Thecc1EG046403 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 85496-85995 Theobroma cacao
Thecc1EG046403 1.0kb upstream 1.0kb upstream 2856 true cacao1chloroplast: 85996-88851 Theobroma cacao
Thecc1EG046403 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 87852-88851 Theobroma cacao
Thecc1EG046403 1.0kb downstream 1.0kb downstream 2856 true cacao1chloroplast: 84996-87851 Theobroma cacao
Thecc1EG046403 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 84996-85995 Theobroma cacao
Thecc1EG046403 2.0kb upstream 2.0kb upstream 3856 true cacao1chloroplast: 85996-89851 Theobroma cacao
Thecc1EG046403 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 87852-89851 Theobroma cacao
Thecc1EG046403 2.0kb downstream 2.0kb downstream 3856 true cacao1chloroplast: 83996-87851 Theobroma cacao
Thecc1EG046403 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 83996-85995 Theobroma cacao
Thecc1EG046403 5.0kb upstream 5.0kb upstream 6856 true cacao1chloroplast: 85996-92851 Theobroma cacao
Thecc1EG046403 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 87852-92851 Theobroma cacao
Thecc1EG046403 5.0kb downstream 5.0kb downstream 6856 true cacao1chloroplast: 80996-87851 Theobroma cacao
Thecc1EG046403 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 80996-85995 Theobroma cacao
Thecc1EG046403 10.0kb upstream 10.0kb upstream 11856 true cacao1chloroplast: 85996-97851 Theobroma cacao
Thecc1EG046403 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 87852-97851 Theobroma cacao
Thecc1EG046403 10.0kb downstream 10.0kb downstream 11856 true cacao1chloroplast: 75996-87851 Theobroma cacao
Thecc1EG046403 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 75996-85995 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828728 5264 Brassicales-Malvales View MSA
124321551 5266 SBM View MSA
124248096 5268 Malvidae View MSA
124050236 5270 Rosid View MSA
123751101 5271 Pentapetalae View MSA
122796266 5272 Eudicot View MSA
122045419 5273 Angiosperm View MSA
121351411 5274 Embryophyte View MSA
123382156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain