Gene : Thecc1EG046377 T. cacao v1.1
Defline:  (1 of 1) K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) Genomic Order:  8
Name:  ? Thecc1EG046377 Secondary Identifier:  ? PAC:27459567
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046377 0.5kb upstream 0.5kb upstream 7263 true cacao1chloroplast: 15719-22981 Theobroma cacao
Thecc1EG046377 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 22482-22981 Theobroma cacao
Thecc1EG046377 0.5kb downstream 0.5kb downstream 7263 true cacao1chloroplast: 15219-22481 Theobroma cacao
Thecc1EG046377 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 15219-15718 Theobroma cacao
Thecc1EG046377 1.0kb upstream 1.0kb upstream 7763 true cacao1chloroplast: 15719-23481 Theobroma cacao
Thecc1EG046377 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 22482-23481 Theobroma cacao
Thecc1EG046377 1.0kb downstream 1.0kb downstream 7763 true cacao1chloroplast: 14719-22481 Theobroma cacao
Thecc1EG046377 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 14719-15718 Theobroma cacao
Thecc1EG046377 2.0kb upstream 2.0kb upstream 8763 true cacao1chloroplast: 15719-24481 Theobroma cacao
Thecc1EG046377 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 22482-24481 Theobroma cacao
Thecc1EG046377 2.0kb downstream 2.0kb downstream 8763 true cacao1chloroplast: 13719-22481 Theobroma cacao
Thecc1EG046377 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 13719-15718 Theobroma cacao
Thecc1EG046377 5.0kb upstream 5.0kb upstream 11763 true cacao1chloroplast: 15719-27481 Theobroma cacao
Thecc1EG046377 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 22482-27481 Theobroma cacao
Thecc1EG046377 5.0kb downstream 5.0kb downstream 11763 true cacao1chloroplast: 10719-22481 Theobroma cacao
Thecc1EG046377 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 10719-15718 Theobroma cacao
Thecc1EG046377 10.0kb upstream 10.0kb upstream 16763 true cacao1chloroplast: 15719-32481 Theobroma cacao
Thecc1EG046377 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 22482-32481 Theobroma cacao
Thecc1EG046377 10.0kb downstream 10.0kb downstream 16763 true cacao1chloroplast: 5719-22481 Theobroma cacao
Thecc1EG046377 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 5719-15718 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836804 5264 Brassicales-Malvales View MSA
124322207 5266 SBM View MSA
124248135 5268 Malvidae View MSA
124037986 5270 Rosid View MSA
123751683 5271 Pentapetalae View MSA
122774135 5272 Eudicot View MSA
122050148 5273 Angiosperm View MSA
121311763 5274 Embryophyte View MSA
123426642 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain