Gene : Thecc1EG046375 T. cacao v1.1
Defline:  (1 of 1) K02110 - F-type H+-transporting ATPase subunit c (ATPF0C, atpE) Genomic Order:  5
Name:  ? Thecc1EG046375 Secondary Identifier:  ? PAC:27459560
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6126 Theobroma cacao pathologic  
Tcacao PWY-7219 Theobroma cacao pathologic  
Tcacao PWY-7229 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046375 0.5kb upstream 0.5kb upstream 1861 true cacao1chloroplast: 12481-14341 Theobroma cacao
Thecc1EG046375 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 13842-14341 Theobroma cacao
Thecc1EG046375 0.5kb downstream 0.5kb downstream 1861 true cacao1chloroplast: 11981-13841 Theobroma cacao
Thecc1EG046375 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 11981-12480 Theobroma cacao
Thecc1EG046375 1.0kb upstream 1.0kb upstream 2361 true cacao1chloroplast: 12481-14841 Theobroma cacao
Thecc1EG046375 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 13842-14841 Theobroma cacao
Thecc1EG046375 1.0kb downstream 1.0kb downstream 2361 true cacao1chloroplast: 11481-13841 Theobroma cacao
Thecc1EG046375 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 11481-12480 Theobroma cacao
Thecc1EG046375 2.0kb upstream 2.0kb upstream 3361 true cacao1chloroplast: 12481-15841 Theobroma cacao
Thecc1EG046375 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 13842-15841 Theobroma cacao
Thecc1EG046375 2.0kb downstream 2.0kb downstream 3361 true cacao1chloroplast: 10481-13841 Theobroma cacao
Thecc1EG046375 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 10481-12480 Theobroma cacao
Thecc1EG046375 5.0kb upstream 5.0kb upstream 6361 true cacao1chloroplast: 12481-18841 Theobroma cacao
Thecc1EG046375 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 13842-18841 Theobroma cacao
Thecc1EG046375 5.0kb downstream 5.0kb downstream 6361 true cacao1chloroplast: 7481-13841 Theobroma cacao
Thecc1EG046375 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 7481-12480 Theobroma cacao
Thecc1EG046375 10.0kb upstream 10.0kb upstream 11361 true cacao1chloroplast: 12481-23841 Theobroma cacao
Thecc1EG046375 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 13842-23841 Theobroma cacao
Thecc1EG046375 10.0kb downstream 10.0kb downstream 11361 true cacao1chloroplast: 2481-13841 Theobroma cacao
Thecc1EG046375 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 2481-12480 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
123832934 5264 Brassicales-Malvales View MSA
124321834 5266 SBM View MSA
124248078 5268 Malvidae View MSA
124073971 5270 Rosid View MSA
123751411 5271 Pentapetalae View MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain