Gene : Thecc1EG000100 T. cacao v1.1
Defline:  (1 of 2) PTHR33070//PTHR33070:SF3 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  82
Name:  ? Thecc1EG000100 Secondary Identifier:  ? PAC:27437048
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000100 0.5kb upstream 0.5kb upstream 1706 true scaffold_1: 422991-424696 Theobroma cacao
Thecc1EG000100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 422991-423490 Theobroma cacao
Thecc1EG000100 0.5kb downstream 0.5kb downstream 1706 true scaffold_1: 423491-425196 Theobroma cacao
Thecc1EG000100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 424697-425196 Theobroma cacao
Thecc1EG000100 1.0kb upstream 1.0kb upstream 2206 true scaffold_1: 422491-424696 Theobroma cacao
Thecc1EG000100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 422491-423490 Theobroma cacao
Thecc1EG000100 1.0kb downstream 1.0kb downstream 2206 true scaffold_1: 423491-425696 Theobroma cacao
Thecc1EG000100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 424697-425696 Theobroma cacao
Thecc1EG000100 2.0kb upstream 2.0kb upstream 3206 true scaffold_1: 421491-424696 Theobroma cacao
Thecc1EG000100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 421491-423490 Theobroma cacao
Thecc1EG000100 2.0kb downstream 2.0kb downstream 3206 true scaffold_1: 423491-426696 Theobroma cacao
Thecc1EG000100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 424697-426696 Theobroma cacao
Thecc1EG000100 5.0kb upstream 5.0kb upstream 6206 true scaffold_1: 418491-424696 Theobroma cacao
Thecc1EG000100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 418491-423490 Theobroma cacao
Thecc1EG000100 5.0kb downstream 5.0kb downstream 6206 true scaffold_1: 423491-429696 Theobroma cacao
Thecc1EG000100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 424697-429696 Theobroma cacao
Thecc1EG000100 10.0kb upstream 10.0kb upstream 11206 true scaffold_1: 413491-424696 Theobroma cacao
Thecc1EG000100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 413491-423490 Theobroma cacao
Thecc1EG000100 10.0kb downstream 10.0kb downstream 11206 true scaffold_1: 423491-434696 Theobroma cacao
Thecc1EG000100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 424697-434696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827513 5264 Brassicales-Malvales View MSA
124350956 5266 SBM View MSA
124248071 5268 Malvidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain