Gene : Thecc1EG000082 T. cacao v1.1
Defline:  (1 of 1) PTHR23416//PTHR23416:SF63 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  67
Name:  ? Thecc1EG000082 Secondary Identifier:  ? PAC:27436781
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYSTSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-6936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000082 0.5kb upstream 0.5kb upstream 5779 true scaffold_1: 345168-350946 Theobroma cacao
Thecc1EG000082 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 350447-350946 Theobroma cacao
Thecc1EG000082 0.5kb downstream 0.5kb downstream 5779 true scaffold_1: 344668-350446 Theobroma cacao
Thecc1EG000082 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 344668-345167 Theobroma cacao
Thecc1EG000082 1.0kb upstream 1.0kb upstream 6279 true scaffold_1: 345168-351446 Theobroma cacao
Thecc1EG000082 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 350447-351446 Theobroma cacao
Thecc1EG000082 1.0kb downstream 1.0kb downstream 6279 true scaffold_1: 344168-350446 Theobroma cacao
Thecc1EG000082 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 344168-345167 Theobroma cacao
Thecc1EG000082 2.0kb upstream 2.0kb upstream 7279 true scaffold_1: 345168-352446 Theobroma cacao
Thecc1EG000082 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 350447-352446 Theobroma cacao
Thecc1EG000082 2.0kb downstream 2.0kb downstream 7279 true scaffold_1: 343168-350446 Theobroma cacao
Thecc1EG000082 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 343168-345167 Theobroma cacao
Thecc1EG000082 5.0kb upstream 5.0kb upstream 10279 true scaffold_1: 345168-355446 Theobroma cacao
Thecc1EG000082 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 350447-355446 Theobroma cacao
Thecc1EG000082 5.0kb downstream 5.0kb downstream 10279 true scaffold_1: 340168-350446 Theobroma cacao
Thecc1EG000082 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 340168-345167 Theobroma cacao
Thecc1EG000082 10.0kb upstream 10.0kb upstream 15279 true scaffold_1: 345168-360446 Theobroma cacao
Thecc1EG000082 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 350447-360446 Theobroma cacao
Thecc1EG000082 10.0kb downstream 10.0kb downstream 15279 true scaffold_1: 335168-350446 Theobroma cacao
Thecc1EG000082 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 335168-345167 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain