Gene : Thecc1EG000087 T. cacao v1.1
Defline:  (1 of 2) PTHR10426//PTHR10426:SF4 - STRICTOSIDINE SYNTHASE-RELATED // FI18644P1-RELATED Genomic Order:  72
Name:  ? Thecc1EG000087 Secondary Identifier:  ? PAC:27434296
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000087 0.5kb upstream 0.5kb upstream 5064 true scaffold_1: 362355-367418 Theobroma cacao
Thecc1EG000087 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 366919-367418 Theobroma cacao
Thecc1EG000087 0.5kb downstream 0.5kb downstream 5064 true scaffold_1: 361855-366918 Theobroma cacao
Thecc1EG000087 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 361855-362354 Theobroma cacao
Thecc1EG000087 1.0kb upstream 1.0kb upstream 5564 true scaffold_1: 362355-367918 Theobroma cacao
Thecc1EG000087 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 366919-367918 Theobroma cacao
Thecc1EG000087 1.0kb downstream 1.0kb downstream 5564 true scaffold_1: 361355-366918 Theobroma cacao
Thecc1EG000087 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 361355-362354 Theobroma cacao
Thecc1EG000087 2.0kb upstream 2.0kb upstream 6564 true scaffold_1: 362355-368918 Theobroma cacao
Thecc1EG000087 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 366919-368918 Theobroma cacao
Thecc1EG000087 2.0kb downstream 2.0kb downstream 6564 true scaffold_1: 360355-366918 Theobroma cacao
Thecc1EG000087 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 360355-362354 Theobroma cacao
Thecc1EG000087 5.0kb upstream 5.0kb upstream 9564 true scaffold_1: 362355-371918 Theobroma cacao
Thecc1EG000087 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 366919-371918 Theobroma cacao
Thecc1EG000087 5.0kb downstream 5.0kb downstream 9564 true scaffold_1: 357355-366918 Theobroma cacao
Thecc1EG000087 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 357355-362354 Theobroma cacao
Thecc1EG000087 10.0kb upstream 10.0kb upstream 14564 true scaffold_1: 362355-376918 Theobroma cacao
Thecc1EG000087 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 366919-376918 Theobroma cacao
Thecc1EG000087 10.0kb downstream 10.0kb downstream 14564 true scaffold_1: 352355-366918 Theobroma cacao
Thecc1EG000087 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 352355-362354 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840194 5264 Brassicales-Malvales View MSA
124339296 5266 SBM View MSA
124239210 5268 Malvidae View MSA
124063956 5270 Rosid View MSA
123752998 5271 Pentapetalae View MSA
122789365 5272 Eudicot View MSA
122048582 5273 Angiosperm View MSA
121348061 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain