Gene : Thecc1EG000056 T. cacao v1.1
Defline:  (1 of 2) PTHR11216//PTHR11216:SF72 - EH DOMAIN // CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  43
Name:  ? Thecc1EG000056 Secondary Identifier:  ? PAC:27433257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000056 0.5kb upstream 0.5kb upstream 9999 true scaffold_1: 214531-224529 Theobroma cacao
Thecc1EG000056 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 224030-224529 Theobroma cacao
Thecc1EG000056 0.5kb downstream 0.5kb downstream 9999 true scaffold_1: 214031-224029 Theobroma cacao
Thecc1EG000056 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 214031-214530 Theobroma cacao
Thecc1EG000056 1.0kb upstream 1.0kb upstream 10499 true scaffold_1: 214531-225029 Theobroma cacao
Thecc1EG000056 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 224030-225029 Theobroma cacao
Thecc1EG000056 1.0kb downstream 1.0kb downstream 10499 true scaffold_1: 213531-224029 Theobroma cacao
Thecc1EG000056 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 213531-214530 Theobroma cacao
Thecc1EG000056 2.0kb upstream 2.0kb upstream 11499 true scaffold_1: 214531-226029 Theobroma cacao
Thecc1EG000056 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 224030-226029 Theobroma cacao
Thecc1EG000056 2.0kb downstream 2.0kb downstream 11499 true scaffold_1: 212531-224029 Theobroma cacao
Thecc1EG000056 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 212531-214530 Theobroma cacao
Thecc1EG000056 5.0kb upstream 5.0kb upstream 14499 true scaffold_1: 214531-229029 Theobroma cacao
Thecc1EG000056 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 224030-229029 Theobroma cacao
Thecc1EG000056 5.0kb downstream 5.0kb downstream 14499 true scaffold_1: 209531-224029 Theobroma cacao
Thecc1EG000056 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 209531-214530 Theobroma cacao
Thecc1EG000056 10.0kb upstream 10.0kb upstream 19499 true scaffold_1: 214531-234029 Theobroma cacao
Thecc1EG000056 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 224030-234029 Theobroma cacao
Thecc1EG000056 10.0kb downstream 10.0kb downstream 19499 true scaffold_1: 204531-224029 Theobroma cacao
Thecc1EG000056 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 204531-214530 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840175 5264 Brassicales-Malvales View MSA
124339695 5266 SBM View MSA
124251840 5268 Malvidae View MSA
124067152 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain