Gene : Thecc1EG000233 T. cacao v1.1
Defline:  (1 of 2) PTHR11467:SF50 - HISTONE H1 Genomic Order:  201
Name:  ? Thecc1EG000233 Secondary Identifier:  ? PAC:27436409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000233 0.5kb upstream 0.5kb upstream 1496 true scaffold_1: 937658-939153 Theobroma cacao
Thecc1EG000233 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 937658-938157 Theobroma cacao
Thecc1EG000233 0.5kb downstream 0.5kb downstream 1496 true scaffold_1: 938158-939653 Theobroma cacao
Thecc1EG000233 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 939154-939653 Theobroma cacao
Thecc1EG000233 1.0kb upstream 1.0kb upstream 1996 true scaffold_1: 937158-939153 Theobroma cacao
Thecc1EG000233 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 937158-938157 Theobroma cacao
Thecc1EG000233 1.0kb downstream 1.0kb downstream 1996 true scaffold_1: 938158-940153 Theobroma cacao
Thecc1EG000233 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 939154-940153 Theobroma cacao
Thecc1EG000233 2.0kb upstream 2.0kb upstream 2996 true scaffold_1: 936158-939153 Theobroma cacao
Thecc1EG000233 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 936158-938157 Theobroma cacao
Thecc1EG000233 2.0kb downstream 2.0kb downstream 2996 true scaffold_1: 938158-941153 Theobroma cacao
Thecc1EG000233 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 939154-941153 Theobroma cacao
Thecc1EG000233 5.0kb upstream 5.0kb upstream 5996 true scaffold_1: 933158-939153 Theobroma cacao
Thecc1EG000233 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 933158-938157 Theobroma cacao
Thecc1EG000233 5.0kb downstream 5.0kb downstream 5996 true scaffold_1: 938158-944153 Theobroma cacao
Thecc1EG000233 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 939154-944153 Theobroma cacao
Thecc1EG000233 10.0kb upstream 10.0kb upstream 10996 true scaffold_1: 928158-939153 Theobroma cacao
Thecc1EG000233 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 928158-938157 Theobroma cacao
Thecc1EG000233 10.0kb downstream 10.0kb downstream 10996 true scaffold_1: 938158-949153 Theobroma cacao
Thecc1EG000233 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 939154-949153 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830192 5264 Brassicales-Malvales View MSA
124341571 5266 SBM View MSA
124245931 5268 Malvidae View MSA
124061860 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain