Gene : Thecc1EG000164 T. cacao v1.1
Defline:  (1 of 11) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) Genomic Order:  137
Name:  ? Thecc1EG000164 Secondary Identifier:  ? PAC:27435351
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000164 0.5kb upstream 0.5kb upstream 1448 true scaffold_1: 650862-652309 Theobroma cacao
Thecc1EG000164 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 651810-652309 Theobroma cacao
Thecc1EG000164 0.5kb downstream 0.5kb downstream 1448 true scaffold_1: 650362-651809 Theobroma cacao
Thecc1EG000164 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 650362-650861 Theobroma cacao
Thecc1EG000164 1.0kb upstream 1.0kb upstream 1948 true scaffold_1: 650862-652809 Theobroma cacao
Thecc1EG000164 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 651810-652809 Theobroma cacao
Thecc1EG000164 1.0kb downstream 1.0kb downstream 1948 true scaffold_1: 649862-651809 Theobroma cacao
Thecc1EG000164 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 649862-650861 Theobroma cacao
Thecc1EG000164 2.0kb upstream 2.0kb upstream 2948 true scaffold_1: 650862-653809 Theobroma cacao
Thecc1EG000164 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 651810-653809 Theobroma cacao
Thecc1EG000164 2.0kb downstream 2.0kb downstream 2948 true scaffold_1: 648862-651809 Theobroma cacao
Thecc1EG000164 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 648862-650861 Theobroma cacao
Thecc1EG000164 5.0kb upstream 5.0kb upstream 5948 true scaffold_1: 650862-656809 Theobroma cacao
Thecc1EG000164 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 651810-656809 Theobroma cacao
Thecc1EG000164 5.0kb downstream 5.0kb downstream 5948 true scaffold_1: 645862-651809 Theobroma cacao
Thecc1EG000164 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 645862-650861 Theobroma cacao
Thecc1EG000164 10.0kb upstream 10.0kb upstream 10948 true scaffold_1: 650862-661809 Theobroma cacao
Thecc1EG000164 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 651810-661809 Theobroma cacao
Thecc1EG000164 10.0kb downstream 10.0kb downstream 10948 true scaffold_1: 640862-651809 Theobroma cacao
Thecc1EG000164 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 640862-650861 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030981 5273 Angiosperm View MSA
123842039 5264 Brassicales-Malvales View MSA
124323203 5266 SBM View MSA
124255587 5268 Malvidae View MSA
124041272 5270 Rosid View MSA
123647489 5271 Pentapetalae View MSA
122798530 5272 Eudicot View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain