Gene : Thecc1EG000133 T. cacao v1.1
Defline:  (1 of 1) PTHR11670//PTHR11670:SF40 - ACONITASE // ACONITATE HYDRATASE 1 Genomic Order:  110
Name:  ? Thecc1EG000133 Secondary Identifier:  ? PAC:27436176
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000133 0.5kb upstream 0.5kb upstream 7617 true scaffold_1: 525406-533022 Theobroma cacao
Thecc1EG000133 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 532523-533022 Theobroma cacao
Thecc1EG000133 0.5kb downstream 0.5kb downstream 7617 true scaffold_1: 524906-532522 Theobroma cacao
Thecc1EG000133 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 524906-525405 Theobroma cacao
Thecc1EG000133 1.0kb upstream 1.0kb upstream 8117 true scaffold_1: 525406-533522 Theobroma cacao
Thecc1EG000133 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 532523-533522 Theobroma cacao
Thecc1EG000133 1.0kb downstream 1.0kb downstream 8117 true scaffold_1: 524406-532522 Theobroma cacao
Thecc1EG000133 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 524406-525405 Theobroma cacao
Thecc1EG000133 2.0kb upstream 2.0kb upstream 9117 true scaffold_1: 525406-534522 Theobroma cacao
Thecc1EG000133 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 532523-534522 Theobroma cacao
Thecc1EG000133 2.0kb downstream 2.0kb downstream 9117 true scaffold_1: 523406-532522 Theobroma cacao
Thecc1EG000133 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 523406-525405 Theobroma cacao
Thecc1EG000133 5.0kb upstream 5.0kb upstream 12117 true scaffold_1: 525406-537522 Theobroma cacao
Thecc1EG000133 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 532523-537522 Theobroma cacao
Thecc1EG000133 5.0kb downstream 5.0kb downstream 12117 true scaffold_1: 520406-532522 Theobroma cacao
Thecc1EG000133 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 520406-525405 Theobroma cacao
Thecc1EG000133 10.0kb upstream 10.0kb upstream 17117 true scaffold_1: 525406-542522 Theobroma cacao
Thecc1EG000133 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 532523-542522 Theobroma cacao
Thecc1EG000133 10.0kb downstream 10.0kb downstream 17117 true scaffold_1: 515406-532522 Theobroma cacao
Thecc1EG000133 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 515406-525405 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836959 5264 Brassicales-Malvales View MSA
124346925 5266 SBM View MSA
124245948 5268 Malvidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain