Gene : Thecc1EG000399 T. cacao v1.1
Defline:  (1 of 1) PTHR31636//PTHR31636:SF65 - FAMILY NOT NAMED // SCARECROW-LIKE PROTEIN 4-RELATED Genomic Order:  348
Name:  ? Thecc1EG000399 Secondary Identifier:  ? PAC:27436224
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000399 0.5kb upstream 0.5kb upstream 4937 true scaffold_1: 1624776-1629712 Theobroma cacao
Thecc1EG000399 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1629213-1629712 Theobroma cacao
Thecc1EG000399 0.5kb downstream 0.5kb downstream 4937 true scaffold_1: 1624276-1629212 Theobroma cacao
Thecc1EG000399 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1624276-1624775 Theobroma cacao
Thecc1EG000399 1.0kb upstream 1.0kb upstream 5437 true scaffold_1: 1624776-1630212 Theobroma cacao
Thecc1EG000399 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1629213-1630212 Theobroma cacao
Thecc1EG000399 1.0kb downstream 1.0kb downstream 5437 true scaffold_1: 1623776-1629212 Theobroma cacao
Thecc1EG000399 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1623776-1624775 Theobroma cacao
Thecc1EG000399 2.0kb upstream 2.0kb upstream 6437 true scaffold_1: 1624776-1631212 Theobroma cacao
Thecc1EG000399 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1629213-1631212 Theobroma cacao
Thecc1EG000399 2.0kb downstream 2.0kb downstream 6437 true scaffold_1: 1622776-1629212 Theobroma cacao
Thecc1EG000399 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1622776-1624775 Theobroma cacao
Thecc1EG000399 5.0kb upstream 5.0kb upstream 9437 true scaffold_1: 1624776-1634212 Theobroma cacao
Thecc1EG000399 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1629213-1634212 Theobroma cacao
Thecc1EG000399 5.0kb downstream 5.0kb downstream 9437 true scaffold_1: 1619776-1629212 Theobroma cacao
Thecc1EG000399 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1619776-1624775 Theobroma cacao
Thecc1EG000399 10.0kb upstream 10.0kb upstream 14437 true scaffold_1: 1624776-1639212 Theobroma cacao
Thecc1EG000399 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1629213-1639212 Theobroma cacao
Thecc1EG000399 10.0kb downstream 10.0kb downstream 14437 true scaffold_1: 1614776-1629212 Theobroma cacao
Thecc1EG000399 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1614776-1624775 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835492 5264 Brassicales-Malvales View MSA
124344748 5266 SBM View MSA
124244244 5268 Malvidae View MSA
124066285 5270 Rosid View MSA
123739622 5271 Pentapetalae View MSA
122786764 5272 Eudicot View MSA
122043818 5273 Angiosperm View MSA
121346051 5274 Embryophyte View MSA
123380313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain