Gene : Thecc1EG000386 T. cacao v1.1
Defline:  (1 of 3) PTHR10668//PTHR10668:SF83 - PHYTOENE DEHYDROGENASE // PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  337
Name:  ? Thecc1EG000386 Secondary Identifier:  ? PAC:27435195
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000386 0.5kb upstream 0.5kb upstream 7494 true scaffold_1: 1571949-1579442 Theobroma cacao
Thecc1EG000386 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1571949-1572448 Theobroma cacao
Thecc1EG000386 0.5kb downstream 0.5kb downstream 7494 true scaffold_1: 1572449-1579942 Theobroma cacao
Thecc1EG000386 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1579443-1579942 Theobroma cacao
Thecc1EG000386 1.0kb upstream 1.0kb upstream 7994 true scaffold_1: 1571449-1579442 Theobroma cacao
Thecc1EG000386 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1571449-1572448 Theobroma cacao
Thecc1EG000386 1.0kb downstream 1.0kb downstream 7994 true scaffold_1: 1572449-1580442 Theobroma cacao
Thecc1EG000386 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1579443-1580442 Theobroma cacao
Thecc1EG000386 2.0kb upstream 2.0kb upstream 8994 true scaffold_1: 1570449-1579442 Theobroma cacao
Thecc1EG000386 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1570449-1572448 Theobroma cacao
Thecc1EG000386 2.0kb downstream 2.0kb downstream 8994 true scaffold_1: 1572449-1581442 Theobroma cacao
Thecc1EG000386 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1579443-1581442 Theobroma cacao
Thecc1EG000386 5.0kb upstream 5.0kb upstream 11994 true scaffold_1: 1567449-1579442 Theobroma cacao
Thecc1EG000386 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1567449-1572448 Theobroma cacao
Thecc1EG000386 5.0kb downstream 5.0kb downstream 11994 true scaffold_1: 1572449-1584442 Theobroma cacao
Thecc1EG000386 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1579443-1584442 Theobroma cacao
Thecc1EG000386 10.0kb upstream 10.0kb upstream 16994 true scaffold_1: 1562449-1579442 Theobroma cacao
Thecc1EG000386 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1562449-1572448 Theobroma cacao
Thecc1EG000386 10.0kb downstream 10.0kb downstream 16994 true scaffold_1: 1572449-1589442 Theobroma cacao
Thecc1EG000386 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1579443-1589442 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825504 5264 Brassicales-Malvales View MSA
124348969 5266 SBM View MSA
124247390 5268 Malvidae View MSA
124072809 5270 Rosid View MSA
123745918 5271 Pentapetalae View MSA
122796852 5272 Eudicot View MSA
122043092 5273 Angiosperm View MSA
121344165 5274 Embryophyte View MSA
123379989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain