Gene : Thecc1EG000374 T. cacao v1.1
Defline:  (1 of 3) PTHR10992//PTHR10992:SF838 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  326
Name:  ? Thecc1EG000374 Secondary Identifier:  ? PAC:27437393
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  
Tcacao PWY-7420 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000374 0.5kb upstream 0.5kb upstream 3418 true scaffold_1: 1533770-1537187 Theobroma cacao
Thecc1EG000374 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1536688-1537187 Theobroma cacao
Thecc1EG000374 0.5kb downstream 0.5kb downstream 3418 true scaffold_1: 1533270-1536687 Theobroma cacao
Thecc1EG000374 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1533270-1533769 Theobroma cacao
Thecc1EG000374 1.0kb upstream 1.0kb upstream 3918 true scaffold_1: 1533770-1537687 Theobroma cacao
Thecc1EG000374 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1536688-1537687 Theobroma cacao
Thecc1EG000374 1.0kb downstream 1.0kb downstream 3918 true scaffold_1: 1532770-1536687 Theobroma cacao
Thecc1EG000374 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1532770-1533769 Theobroma cacao
Thecc1EG000374 2.0kb upstream 2.0kb upstream 4918 true scaffold_1: 1533770-1538687 Theobroma cacao
Thecc1EG000374 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1536688-1538687 Theobroma cacao
Thecc1EG000374 2.0kb downstream 2.0kb downstream 4918 true scaffold_1: 1531770-1536687 Theobroma cacao
Thecc1EG000374 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1531770-1533769 Theobroma cacao
Thecc1EG000374 5.0kb upstream 5.0kb upstream 7918 true scaffold_1: 1533770-1541687 Theobroma cacao
Thecc1EG000374 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1536688-1541687 Theobroma cacao
Thecc1EG000374 5.0kb downstream 5.0kb downstream 7918 true scaffold_1: 1528770-1536687 Theobroma cacao
Thecc1EG000374 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1528770-1533769 Theobroma cacao
Thecc1EG000374 10.0kb upstream 10.0kb upstream 12918 true scaffold_1: 1533770-1546687 Theobroma cacao
Thecc1EG000374 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1536688-1546687 Theobroma cacao
Thecc1EG000374 10.0kb downstream 10.0kb downstream 12918 true scaffold_1: 1523770-1536687 Theobroma cacao
Thecc1EG000374 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1523770-1533769 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835615 5264 Brassicales-Malvales View MSA
124337239 5266 SBM View MSA
124245077 5268 Malvidae View MSA
124060734 5270 Rosid View MSA
123741073 5271 Pentapetalae View MSA
122790529 5272 Eudicot View MSA
122043617 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain