Gene : Thecc1EG000352 T. cacao v1.1

Defline:  (1 of 4) KOG2521 - Uncharacterized conserved protein Genomic Order:  309
Name:  ? Thecc1EG000352 Secondary Identifier:  ? PAC:27431812

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000352 0.5kb upstream 0.5kb upstream 3593 true scaffold_1: 1450612-1454204 Theobroma cacao
Thecc1EG000352 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1450612-1451111 Theobroma cacao
Thecc1EG000352 0.5kb downstream 0.5kb downstream 3593 true scaffold_1: 1451112-1454704 Theobroma cacao
Thecc1EG000352 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1454205-1454704 Theobroma cacao
Thecc1EG000352 1.0kb upstream 1.0kb upstream 4093 true scaffold_1: 1450112-1454204 Theobroma cacao
Thecc1EG000352 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1450112-1451111 Theobroma cacao
Thecc1EG000352 1.0kb downstream 1.0kb downstream 4093 true scaffold_1: 1451112-1455204 Theobroma cacao
Thecc1EG000352 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1454205-1455204 Theobroma cacao
Thecc1EG000352 2.0kb upstream 2.0kb upstream 5093 true scaffold_1: 1449112-1454204 Theobroma cacao
Thecc1EG000352 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1449112-1451111 Theobroma cacao
Thecc1EG000352 2.0kb downstream 2.0kb downstream 5093 true scaffold_1: 1451112-1456204 Theobroma cacao
Thecc1EG000352 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1454205-1456204 Theobroma cacao
Thecc1EG000352 5.0kb upstream 5.0kb upstream 8093 true scaffold_1: 1446112-1454204 Theobroma cacao
Thecc1EG000352 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1446112-1451111 Theobroma cacao
Thecc1EG000352 5.0kb downstream 5.0kb downstream 8093 true scaffold_1: 1451112-1459204 Theobroma cacao
Thecc1EG000352 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1454205-1459204 Theobroma cacao
Thecc1EG000352 10.0kb upstream 10.0kb upstream 13093 true scaffold_1: 1441112-1454204 Theobroma cacao
Thecc1EG000352 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1441112-1451111 Theobroma cacao
Thecc1EG000352 10.0kb downstream 10.0kb downstream 13093 true scaffold_1: 1451112-1464204 Theobroma cacao
Thecc1EG000352 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1454205-1464204 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832417 5264 Brassicales-Malvales View MSA
124338899 5266 SBM View MSA
124252292 5268 Malvidae View MSA
124068157 5270 Rosid View MSA
123746451 5271 Pentapetalae View MSA
122789027 5272 Eudicot View MSA
122048979 5273 Angiosperm View MSA
121347494 5274 Embryophyte View MSA
123425038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain