Gene : Thecc1EG000337 T. cacao v1.1

Defline:  (1 of 8) PF14364 - Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  294
Name:  ? Thecc1EG000337 Secondary Identifier:  ? PAC:27435100

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000337 0.5kb upstream 0.5kb upstream 1288 true scaffold_1: 1383197-1384484 Theobroma cacao
Thecc1EG000337 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1383985-1384484 Theobroma cacao
Thecc1EG000337 0.5kb downstream 0.5kb downstream 1288 true scaffold_1: 1382697-1383984 Theobroma cacao
Thecc1EG000337 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1382697-1383196 Theobroma cacao
Thecc1EG000337 1.0kb upstream 1.0kb upstream 1788 true scaffold_1: 1383197-1384984 Theobroma cacao
Thecc1EG000337 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1383985-1384984 Theobroma cacao
Thecc1EG000337 1.0kb downstream 1.0kb downstream 1788 true scaffold_1: 1382197-1383984 Theobroma cacao
Thecc1EG000337 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1382197-1383196 Theobroma cacao
Thecc1EG000337 2.0kb upstream 2.0kb upstream 2788 true scaffold_1: 1383197-1385984 Theobroma cacao
Thecc1EG000337 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1383985-1385984 Theobroma cacao
Thecc1EG000337 2.0kb downstream 2.0kb downstream 2788 true scaffold_1: 1381197-1383984 Theobroma cacao
Thecc1EG000337 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1381197-1383196 Theobroma cacao
Thecc1EG000337 5.0kb upstream 5.0kb upstream 5788 true scaffold_1: 1383197-1388984 Theobroma cacao
Thecc1EG000337 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1383985-1388984 Theobroma cacao
Thecc1EG000337 5.0kb downstream 5.0kb downstream 5788 true scaffold_1: 1378197-1383984 Theobroma cacao
Thecc1EG000337 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1378197-1383196 Theobroma cacao
Thecc1EG000337 10.0kb upstream 10.0kb upstream 10788 true scaffold_1: 1383197-1393984 Theobroma cacao
Thecc1EG000337 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1383985-1393984 Theobroma cacao
Thecc1EG000337 10.0kb downstream 10.0kb downstream 10788 true scaffold_1: 1373197-1383984 Theobroma cacao
Thecc1EG000337 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1373197-1383196 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839151 5264 Brassicales-Malvales View MSA
124322565 5266 SBM View MSA
124253220 5268 Malvidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain