Gene : Thecc1EG000318 T. cacao v1.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  278
Name:  ? Thecc1EG000318 Secondary Identifier:  ? PAC:27432784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000318 0.5kb upstream 0.5kb upstream 6108 true scaffold_1: 1307790-1313897 Theobroma cacao
Thecc1EG000318 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1313398-1313897 Theobroma cacao
Thecc1EG000318 0.5kb downstream 0.5kb downstream 6108 true scaffold_1: 1307290-1313397 Theobroma cacao
Thecc1EG000318 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1307290-1307789 Theobroma cacao
Thecc1EG000318 1.0kb upstream 1.0kb upstream 6608 true scaffold_1: 1307790-1314397 Theobroma cacao
Thecc1EG000318 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1313398-1314397 Theobroma cacao
Thecc1EG000318 1.0kb downstream 1.0kb downstream 6608 true scaffold_1: 1306790-1313397 Theobroma cacao
Thecc1EG000318 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1306790-1307789 Theobroma cacao
Thecc1EG000318 2.0kb upstream 2.0kb upstream 7608 true scaffold_1: 1307790-1315397 Theobroma cacao
Thecc1EG000318 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1313398-1315397 Theobroma cacao
Thecc1EG000318 2.0kb downstream 2.0kb downstream 7608 true scaffold_1: 1305790-1313397 Theobroma cacao
Thecc1EG000318 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1305790-1307789 Theobroma cacao
Thecc1EG000318 5.0kb upstream 5.0kb upstream 10608 true scaffold_1: 1307790-1318397 Theobroma cacao
Thecc1EG000318 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1313398-1318397 Theobroma cacao
Thecc1EG000318 5.0kb downstream 5.0kb downstream 10608 true scaffold_1: 1302790-1313397 Theobroma cacao
Thecc1EG000318 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1302790-1307789 Theobroma cacao
Thecc1EG000318 10.0kb upstream 10.0kb upstream 15608 true scaffold_1: 1307790-1323397 Theobroma cacao
Thecc1EG000318 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1313398-1323397 Theobroma cacao
Thecc1EG000318 10.0kb downstream 10.0kb downstream 15608 true scaffold_1: 1297790-1313397 Theobroma cacao
Thecc1EG000318 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1297790-1307789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840908 5264 Brassicales-Malvales View MSA
124350901 5266 SBM View MSA
124246593 5268 Malvidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain