Gene : Thecc1EG000512 T. cacao v1.1
Defline:  (1 of 6) KOG4249 - Uncharacterized conserved protein Genomic Order:  441
Name:  ? Thecc1EG000512 Secondary Identifier:  ? PAC:27434578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000512 0.5kb upstream 0.5kb upstream 4949 true scaffold_1: 2121229-2126177 Theobroma cacao
Thecc1EG000512 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2125678-2126177 Theobroma cacao
Thecc1EG000512 0.5kb downstream 0.5kb downstream 4949 true scaffold_1: 2120729-2125677 Theobroma cacao
Thecc1EG000512 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2120729-2121228 Theobroma cacao
Thecc1EG000512 1.0kb upstream 1.0kb upstream 5449 true scaffold_1: 2121229-2126677 Theobroma cacao
Thecc1EG000512 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2125678-2126677 Theobroma cacao
Thecc1EG000512 1.0kb downstream 1.0kb downstream 5449 true scaffold_1: 2120229-2125677 Theobroma cacao
Thecc1EG000512 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2120229-2121228 Theobroma cacao
Thecc1EG000512 2.0kb upstream 2.0kb upstream 6449 true scaffold_1: 2121229-2127677 Theobroma cacao
Thecc1EG000512 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2125678-2127677 Theobroma cacao
Thecc1EG000512 2.0kb downstream 2.0kb downstream 6449 true scaffold_1: 2119229-2125677 Theobroma cacao
Thecc1EG000512 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2119229-2121228 Theobroma cacao
Thecc1EG000512 5.0kb upstream 5.0kb upstream 9449 true scaffold_1: 2121229-2130677 Theobroma cacao
Thecc1EG000512 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2125678-2130677 Theobroma cacao
Thecc1EG000512 5.0kb downstream 5.0kb downstream 9449 true scaffold_1: 2116229-2125677 Theobroma cacao
Thecc1EG000512 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2116229-2121228 Theobroma cacao
Thecc1EG000512 10.0kb upstream 10.0kb upstream 14449 true scaffold_1: 2121229-2135677 Theobroma cacao
Thecc1EG000512 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2125678-2135677 Theobroma cacao
Thecc1EG000512 10.0kb downstream 10.0kb downstream 14449 true scaffold_1: 2111229-2125677 Theobroma cacao
Thecc1EG000512 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2111229-2121228 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838795 5264 Brassicales-Malvales View MSA
124340699 5266 SBM View MSA
124237813 5268 Malvidae View MSA
124067198 5270 Rosid View MSA
123740356 5271 Pentapetalae View MSA
122792497 5272 Eudicot View MSA
122041565 5273 Angiosperm View MSA
121347717 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain