Gene : Thecc1EG000516 T. cacao v1.1
Defline:  (1 of 93) PF02362 - B3 DNA binding domain (B3) Genomic Order:  445
Name:  ? Thecc1EG000516 Secondary Identifier:  ? PAC:27431809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000516 0.5kb upstream 0.5kb upstream 4879 true scaffold_1: 2141385-2146263 Theobroma cacao
Thecc1EG000516 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2145764-2146263 Theobroma cacao
Thecc1EG000516 0.5kb downstream 0.5kb downstream 4879 true scaffold_1: 2140885-2145763 Theobroma cacao
Thecc1EG000516 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2140885-2141384 Theobroma cacao
Thecc1EG000516 1.0kb upstream 1.0kb upstream 5379 true scaffold_1: 2141385-2146763 Theobroma cacao
Thecc1EG000516 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2145764-2146763 Theobroma cacao
Thecc1EG000516 1.0kb downstream 1.0kb downstream 5379 true scaffold_1: 2140385-2145763 Theobroma cacao
Thecc1EG000516 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2140385-2141384 Theobroma cacao
Thecc1EG000516 2.0kb upstream 2.0kb upstream 6379 true scaffold_1: 2141385-2147763 Theobroma cacao
Thecc1EG000516 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2145764-2147763 Theobroma cacao
Thecc1EG000516 2.0kb downstream 2.0kb downstream 6379 true scaffold_1: 2139385-2145763 Theobroma cacao
Thecc1EG000516 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2139385-2141384 Theobroma cacao
Thecc1EG000516 5.0kb upstream 5.0kb upstream 9379 true scaffold_1: 2141385-2150763 Theobroma cacao
Thecc1EG000516 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2145764-2150763 Theobroma cacao
Thecc1EG000516 5.0kb downstream 5.0kb downstream 9379 true scaffold_1: 2136385-2145763 Theobroma cacao
Thecc1EG000516 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2136385-2141384 Theobroma cacao
Thecc1EG000516 10.0kb upstream 10.0kb upstream 14379 true scaffold_1: 2141385-2155763 Theobroma cacao
Thecc1EG000516 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2145764-2155763 Theobroma cacao
Thecc1EG000516 10.0kb downstream 10.0kb downstream 14379 true scaffold_1: 2131385-2145763 Theobroma cacao
Thecc1EG000516 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2131385-2141384 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841669 5264 Brassicales-Malvales View MSA
124347560 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain