Gene : Thecc1EG000484 T. cacao v1.1
Defline:  (1 of 1) PTHR34262//PTHR34262:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 220 Genomic Order:  418
Name:  ? Thecc1EG000484 Secondary Identifier:  ? PAC:27434952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000484 0.5kb upstream 0.5kb upstream 1709 true scaffold_1: 1997863-1999571 Theobroma cacao
Thecc1EG000484 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1997863-1998362 Theobroma cacao
Thecc1EG000484 0.5kb downstream 0.5kb downstream 1709 true scaffold_1: 1998363-2000071 Theobroma cacao
Thecc1EG000484 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1999572-2000071 Theobroma cacao
Thecc1EG000484 1.0kb upstream 1.0kb upstream 2209 true scaffold_1: 1997363-1999571 Theobroma cacao
Thecc1EG000484 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1997363-1998362 Theobroma cacao
Thecc1EG000484 1.0kb downstream 1.0kb downstream 2209 true scaffold_1: 1998363-2000571 Theobroma cacao
Thecc1EG000484 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1999572-2000571 Theobroma cacao
Thecc1EG000484 2.0kb upstream 2.0kb upstream 3209 true scaffold_1: 1996363-1999571 Theobroma cacao
Thecc1EG000484 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1996363-1998362 Theobroma cacao
Thecc1EG000484 2.0kb downstream 2.0kb downstream 3209 true scaffold_1: 1998363-2001571 Theobroma cacao
Thecc1EG000484 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1999572-2001571 Theobroma cacao
Thecc1EG000484 5.0kb upstream 5.0kb upstream 6209 true scaffold_1: 1993363-1999571 Theobroma cacao
Thecc1EG000484 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1993363-1998362 Theobroma cacao
Thecc1EG000484 5.0kb downstream 5.0kb downstream 6209 true scaffold_1: 1998363-2004571 Theobroma cacao
Thecc1EG000484 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1999572-2004571 Theobroma cacao
Thecc1EG000484 10.0kb upstream 10.0kb upstream 11209 true scaffold_1: 1988363-1999571 Theobroma cacao
Thecc1EG000484 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1988363-1998362 Theobroma cacao
Thecc1EG000484 10.0kb downstream 10.0kb downstream 11209 true scaffold_1: 1998363-2009571 Theobroma cacao
Thecc1EG000484 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1999572-2009571 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815605 5264 Brassicales-Malvales Singleton cluster - no MSA
124312034 5266 SBM Singleton cluster - no MSA
124249333 5268 Malvidae View MSA
124062107 5270 Rosid View MSA
123738657 5271 Pentapetalae View MSA
122791149 5272 Eudicot View MSA
122041844 5273 Angiosperm View MSA
121344309 5274 Embryophyte View MSA
123380020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain