Gene : Thecc1EG000466 T. cacao v1.1
Defline:  (1 of 1) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  405
Name:  ? Thecc1EG000466 Secondary Identifier:  ? PAC:27432178
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000466 0.5kb upstream 0.5kb upstream 4705 true scaffold_1: 1923788-1928492 Theobroma cacao
Thecc1EG000466 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1927993-1928492 Theobroma cacao
Thecc1EG000466 0.5kb downstream 0.5kb downstream 4705 true scaffold_1: 1923288-1927992 Theobroma cacao
Thecc1EG000466 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1923288-1923787 Theobroma cacao
Thecc1EG000466 1.0kb upstream 1.0kb upstream 5205 true scaffold_1: 1923788-1928992 Theobroma cacao
Thecc1EG000466 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1927993-1928992 Theobroma cacao
Thecc1EG000466 1.0kb downstream 1.0kb downstream 5205 true scaffold_1: 1922788-1927992 Theobroma cacao
Thecc1EG000466 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1922788-1923787 Theobroma cacao
Thecc1EG000466 2.0kb upstream 2.0kb upstream 6205 true scaffold_1: 1923788-1929992 Theobroma cacao
Thecc1EG000466 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1927993-1929992 Theobroma cacao
Thecc1EG000466 2.0kb downstream 2.0kb downstream 6205 true scaffold_1: 1921788-1927992 Theobroma cacao
Thecc1EG000466 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1921788-1923787 Theobroma cacao
Thecc1EG000466 5.0kb upstream 5.0kb upstream 9205 true scaffold_1: 1923788-1932992 Theobroma cacao
Thecc1EG000466 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1927993-1932992 Theobroma cacao
Thecc1EG000466 5.0kb downstream 5.0kb downstream 9205 true scaffold_1: 1918788-1927992 Theobroma cacao
Thecc1EG000466 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1918788-1923787 Theobroma cacao
Thecc1EG000466 10.0kb upstream 10.0kb upstream 14205 true scaffold_1: 1923788-1937992 Theobroma cacao
Thecc1EG000466 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1927993-1937992 Theobroma cacao
Thecc1EG000466 10.0kb downstream 10.0kb downstream 14205 true scaffold_1: 1913788-1927992 Theobroma cacao
Thecc1EG000466 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1913788-1923787 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833507 5264 Brassicales-Malvales View MSA
124346212 5266 SBM View MSA
124242114 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain