Gene : Thecc1EG000651 T. cacao v1.1
Defline:  (1 of 1) PTHR10509//PTHR10509:SF19 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  563
Name:  ? Thecc1EG000651 Secondary Identifier:  ? PAC:27433900
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000651 0.5kb upstream 0.5kb upstream 2017 true scaffold_1: 2803698-2805714 Theobroma cacao
Thecc1EG000651 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2803698-2804197 Theobroma cacao
Thecc1EG000651 0.5kb downstream 0.5kb downstream 2017 true scaffold_1: 2804198-2806214 Theobroma cacao
Thecc1EG000651 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2805715-2806214 Theobroma cacao
Thecc1EG000651 1.0kb upstream 1.0kb upstream 2517 true scaffold_1: 2803198-2805714 Theobroma cacao
Thecc1EG000651 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2803198-2804197 Theobroma cacao
Thecc1EG000651 1.0kb downstream 1.0kb downstream 2517 true scaffold_1: 2804198-2806714 Theobroma cacao
Thecc1EG000651 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2805715-2806714 Theobroma cacao
Thecc1EG000651 2.0kb upstream 2.0kb upstream 3517 true scaffold_1: 2802198-2805714 Theobroma cacao
Thecc1EG000651 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2802198-2804197 Theobroma cacao
Thecc1EG000651 2.0kb downstream 2.0kb downstream 3517 true scaffold_1: 2804198-2807714 Theobroma cacao
Thecc1EG000651 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2805715-2807714 Theobroma cacao
Thecc1EG000651 5.0kb upstream 5.0kb upstream 6517 true scaffold_1: 2799198-2805714 Theobroma cacao
Thecc1EG000651 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2799198-2804197 Theobroma cacao
Thecc1EG000651 5.0kb downstream 5.0kb downstream 6517 true scaffold_1: 2804198-2810714 Theobroma cacao
Thecc1EG000651 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2805715-2810714 Theobroma cacao
Thecc1EG000651 10.0kb upstream 10.0kb upstream 11517 true scaffold_1: 2794198-2805714 Theobroma cacao
Thecc1EG000651 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2794198-2804197 Theobroma cacao
Thecc1EG000651 10.0kb downstream 10.0kb downstream 11517 true scaffold_1: 2804198-2815714 Theobroma cacao
Thecc1EG000651 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2805715-2815714 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815774 5264 Brassicales-Malvales Singleton cluster - no MSA
124351809 5266 SBM View MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain