Gene : Thecc1EG000655 T. cacao v1.1

Defline:  (1 of 1) PTHR22884:SF326 - HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 Genomic Order:  567
Name:  ? Thecc1EG000655 Secondary Identifier:  ? PAC:27437123

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000655 0.5kb upstream 0.5kb upstream 9712 true scaffold_1: 2816548-2826259 Theobroma cacao
Thecc1EG000655 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2825760-2826259 Theobroma cacao
Thecc1EG000655 0.5kb downstream 0.5kb downstream 9712 true scaffold_1: 2816048-2825759 Theobroma cacao
Thecc1EG000655 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2816048-2816547 Theobroma cacao
Thecc1EG000655 1.0kb upstream 1.0kb upstream 10212 true scaffold_1: 2816548-2826759 Theobroma cacao
Thecc1EG000655 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2825760-2826759 Theobroma cacao
Thecc1EG000655 1.0kb downstream 1.0kb downstream 10212 true scaffold_1: 2815548-2825759 Theobroma cacao
Thecc1EG000655 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2815548-2816547 Theobroma cacao
Thecc1EG000655 2.0kb upstream 2.0kb upstream 11212 true scaffold_1: 2816548-2827759 Theobroma cacao
Thecc1EG000655 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2825760-2827759 Theobroma cacao
Thecc1EG000655 2.0kb downstream 2.0kb downstream 11212 true scaffold_1: 2814548-2825759 Theobroma cacao
Thecc1EG000655 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2814548-2816547 Theobroma cacao
Thecc1EG000655 5.0kb upstream 5.0kb upstream 14212 true scaffold_1: 2816548-2830759 Theobroma cacao
Thecc1EG000655 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2825760-2830759 Theobroma cacao
Thecc1EG000655 5.0kb downstream 5.0kb downstream 14212 true scaffold_1: 2811548-2825759 Theobroma cacao
Thecc1EG000655 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2811548-2816547 Theobroma cacao
Thecc1EG000655 10.0kb upstream 10.0kb upstream 19212 true scaffold_1: 2816548-2835759 Theobroma cacao
Thecc1EG000655 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2825760-2835759 Theobroma cacao
Thecc1EG000655 10.0kb downstream 10.0kb downstream 19212 true scaffold_1: 2806548-2825759 Theobroma cacao
Thecc1EG000655 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2806548-2816547 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833640 5264 Brassicales-Malvales View MSA
124339559 5266 SBM View MSA
124238185 5268 Malvidae View MSA
124064243 5270 Rosid View MSA
123753114 5271 Pentapetalae View MSA
122787319 5272 Eudicot View MSA
122046199 5273 Angiosperm View MSA
121346478 5274 Embryophyte View MSA
123425138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain