Gene : Thecc1EG000635 T. cacao v1.1

Defline:  (1 of 3) PTHR24361:SF334 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19-RELATED Genomic Order:  550
Name:  ? Thecc1EG000635 Secondary Identifier:  ? PAC:27431733

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000635 0.5kb upstream 0.5kb upstream 1944 true scaffold_1: 2740370-2742313 Theobroma cacao
Thecc1EG000635 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2740370-2740869 Theobroma cacao
Thecc1EG000635 0.5kb downstream 0.5kb downstream 1944 true scaffold_1: 2740870-2742813 Theobroma cacao
Thecc1EG000635 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2742314-2742813 Theobroma cacao
Thecc1EG000635 1.0kb upstream 1.0kb upstream 2444 true scaffold_1: 2739870-2742313 Theobroma cacao
Thecc1EG000635 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2739870-2740869 Theobroma cacao
Thecc1EG000635 1.0kb downstream 1.0kb downstream 2444 true scaffold_1: 2740870-2743313 Theobroma cacao
Thecc1EG000635 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2742314-2743313 Theobroma cacao
Thecc1EG000635 2.0kb upstream 2.0kb upstream 3444 true scaffold_1: 2738870-2742313 Theobroma cacao
Thecc1EG000635 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2738870-2740869 Theobroma cacao
Thecc1EG000635 2.0kb downstream 2.0kb downstream 3444 true scaffold_1: 2740870-2744313 Theobroma cacao
Thecc1EG000635 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2742314-2744313 Theobroma cacao
Thecc1EG000635 5.0kb upstream 5.0kb upstream 6444 true scaffold_1: 2735870-2742313 Theobroma cacao
Thecc1EG000635 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2735870-2740869 Theobroma cacao
Thecc1EG000635 5.0kb downstream 5.0kb downstream 6444 true scaffold_1: 2740870-2747313 Theobroma cacao
Thecc1EG000635 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2742314-2747313 Theobroma cacao
Thecc1EG000635 10.0kb upstream 10.0kb upstream 11444 true scaffold_1: 2730870-2742313 Theobroma cacao
Thecc1EG000635 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2730870-2740869 Theobroma cacao
Thecc1EG000635 10.0kb downstream 10.0kb downstream 11444 true scaffold_1: 2740870-2752313 Theobroma cacao
Thecc1EG000635 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2742314-2752313 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840602 5264 Brassicales-Malvales View MSA
124340230 5266 SBM View MSA
124254057 5268 Malvidae View MSA
124073880 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain