Gene : Thecc1EG000619 T. cacao v1.1

Defline:  (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) Genomic Order:  535
Name:  ? Thecc1EG000619 Secondary Identifier:  ? PAC:27437018

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000619 0.5kb upstream 0.5kb upstream 5772 true scaffold_1: 2641144-2646915 Theobroma cacao
Thecc1EG000619 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2641144-2641643 Theobroma cacao
Thecc1EG000619 0.5kb downstream 0.5kb downstream 5772 true scaffold_1: 2641644-2647415 Theobroma cacao
Thecc1EG000619 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2646916-2647415 Theobroma cacao
Thecc1EG000619 1.0kb upstream 1.0kb upstream 6272 true scaffold_1: 2640644-2646915 Theobroma cacao
Thecc1EG000619 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2640644-2641643 Theobroma cacao
Thecc1EG000619 1.0kb downstream 1.0kb downstream 6272 true scaffold_1: 2641644-2647915 Theobroma cacao
Thecc1EG000619 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2646916-2647915 Theobroma cacao
Thecc1EG000619 2.0kb upstream 2.0kb upstream 7272 true scaffold_1: 2639644-2646915 Theobroma cacao
Thecc1EG000619 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2639644-2641643 Theobroma cacao
Thecc1EG000619 2.0kb downstream 2.0kb downstream 7272 true scaffold_1: 2641644-2648915 Theobroma cacao
Thecc1EG000619 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2646916-2648915 Theobroma cacao
Thecc1EG000619 5.0kb upstream 5.0kb upstream 10272 true scaffold_1: 2636644-2646915 Theobroma cacao
Thecc1EG000619 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2636644-2641643 Theobroma cacao
Thecc1EG000619 5.0kb downstream 5.0kb downstream 10272 true scaffold_1: 2641644-2651915 Theobroma cacao
Thecc1EG000619 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2646916-2651915 Theobroma cacao
Thecc1EG000619 10.0kb upstream 10.0kb upstream 15272 true scaffold_1: 2631644-2646915 Theobroma cacao
Thecc1EG000619 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2631644-2641643 Theobroma cacao
Thecc1EG000619 10.0kb downstream 10.0kb downstream 15272 true scaffold_1: 2641644-2656915 Theobroma cacao
Thecc1EG000619 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2646916-2656915 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831777 5264 Brassicales-Malvales View MSA
124337954 5266 SBM View MSA
124245500 5268 Malvidae View MSA
124066398 5270 Rosid View MSA
123739610 5271 Pentapetalae View MSA
122788896 5272 Eudicot View MSA
122044927 5273 Angiosperm View MSA
121350763 5274 Embryophyte View MSA
123425625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain