Gene : Thecc1EG000610 T. cacao v1.1

Defline:  (1 of 1) PTHR10015//PTHR10015:SF166 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  528
Name:  ? Thecc1EG000610 Secondary Identifier:  ? PAC:27431828

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000610 0.5kb upstream 0.5kb upstream 3381 true scaffold_1: 2592371-2595751 Theobroma cacao
Thecc1EG000610 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2595252-2595751 Theobroma cacao
Thecc1EG000610 0.5kb downstream 0.5kb downstream 3381 true scaffold_1: 2591871-2595251 Theobroma cacao
Thecc1EG000610 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2591871-2592370 Theobroma cacao
Thecc1EG000610 1.0kb upstream 1.0kb upstream 3881 true scaffold_1: 2592371-2596251 Theobroma cacao
Thecc1EG000610 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2595252-2596251 Theobroma cacao
Thecc1EG000610 1.0kb downstream 1.0kb downstream 3881 true scaffold_1: 2591371-2595251 Theobroma cacao
Thecc1EG000610 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2591371-2592370 Theobroma cacao
Thecc1EG000610 2.0kb upstream 2.0kb upstream 4881 true scaffold_1: 2592371-2597251 Theobroma cacao
Thecc1EG000610 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2595252-2597251 Theobroma cacao
Thecc1EG000610 2.0kb downstream 2.0kb downstream 4881 true scaffold_1: 2590371-2595251 Theobroma cacao
Thecc1EG000610 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2590371-2592370 Theobroma cacao
Thecc1EG000610 5.0kb upstream 5.0kb upstream 7881 true scaffold_1: 2592371-2600251 Theobroma cacao
Thecc1EG000610 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2595252-2600251 Theobroma cacao
Thecc1EG000610 5.0kb downstream 5.0kb downstream 7881 true scaffold_1: 2587371-2595251 Theobroma cacao
Thecc1EG000610 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2587371-2592370 Theobroma cacao
Thecc1EG000610 10.0kb upstream 10.0kb upstream 12881 true scaffold_1: 2592371-2605251 Theobroma cacao
Thecc1EG000610 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2595252-2605251 Theobroma cacao
Thecc1EG000610 10.0kb downstream 10.0kb downstream 12881 true scaffold_1: 2582371-2595251 Theobroma cacao
Thecc1EG000610 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2582371-2592370 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839033 5264 Brassicales-Malvales View MSA
124322541 5266 SBM View MSA
124246832 5268 Malvidae View MSA
124060729 5270 Rosid View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain