Gene : Thecc1EG000573 T. cacao v1.1
Defline:  (1 of 4) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase Genomic Order:  496
Name:  ? Thecc1EG000573 Secondary Identifier:  ? PAC:27433888
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5129 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000573 0.5kb upstream 0.5kb upstream 2214 true scaffold_1: 2398462-2400675 Theobroma cacao
Thecc1EG000573 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2400176-2400675 Theobroma cacao
Thecc1EG000573 0.5kb downstream 0.5kb downstream 2214 true scaffold_1: 2397962-2400175 Theobroma cacao
Thecc1EG000573 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2397962-2398461 Theobroma cacao
Thecc1EG000573 1.0kb upstream 1.0kb upstream 2714 true scaffold_1: 2398462-2401175 Theobroma cacao
Thecc1EG000573 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2400176-2401175 Theobroma cacao
Thecc1EG000573 1.0kb downstream 1.0kb downstream 2714 true scaffold_1: 2397462-2400175 Theobroma cacao
Thecc1EG000573 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2397462-2398461 Theobroma cacao
Thecc1EG000573 2.0kb upstream 2.0kb upstream 3714 true scaffold_1: 2398462-2402175 Theobroma cacao
Thecc1EG000573 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2400176-2402175 Theobroma cacao
Thecc1EG000573 2.0kb downstream 2.0kb downstream 3714 true scaffold_1: 2396462-2400175 Theobroma cacao
Thecc1EG000573 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2396462-2398461 Theobroma cacao
Thecc1EG000573 5.0kb upstream 5.0kb upstream 6714 true scaffold_1: 2398462-2405175 Theobroma cacao
Thecc1EG000573 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2400176-2405175 Theobroma cacao
Thecc1EG000573 5.0kb downstream 5.0kb downstream 6714 true scaffold_1: 2393462-2400175 Theobroma cacao
Thecc1EG000573 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2393462-2398461 Theobroma cacao
Thecc1EG000573 10.0kb upstream 10.0kb upstream 11714 true scaffold_1: 2398462-2410175 Theobroma cacao
Thecc1EG000573 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2400176-2410175 Theobroma cacao
Thecc1EG000573 10.0kb downstream 10.0kb downstream 11714 true scaffold_1: 2388462-2400175 Theobroma cacao
Thecc1EG000573 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2388462-2398461 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832562 5264 Brassicales-Malvales View MSA
124346618 5266 SBM View MSA
124243671 5268 Malvidae View MSA
124050243 5270 Rosid View MSA
123736848 5271 Pentapetalae View MSA
122788663 5272 Eudicot View MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain