Gene : Thecc1EG000763 T. cacao v1.1
Defline:  (1 of 4) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  667
Name:  ? Thecc1EG000763 Secondary Identifier:  ? PAC:27436271
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000763 0.5kb upstream 0.5kb upstream 2659 true scaffold_1: 3387994-3390652 Theobroma cacao
Thecc1EG000763 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3390153-3390652 Theobroma cacao
Thecc1EG000763 0.5kb downstream 0.5kb downstream 2659 true scaffold_1: 3387494-3390152 Theobroma cacao
Thecc1EG000763 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3387494-3387993 Theobroma cacao
Thecc1EG000763 1.0kb upstream 1.0kb upstream 3159 true scaffold_1: 3387994-3391152 Theobroma cacao
Thecc1EG000763 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3390153-3391152 Theobroma cacao
Thecc1EG000763 1.0kb downstream 1.0kb downstream 3159 true scaffold_1: 3386994-3390152 Theobroma cacao
Thecc1EG000763 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3386994-3387993 Theobroma cacao
Thecc1EG000763 2.0kb upstream 2.0kb upstream 4159 true scaffold_1: 3387994-3392152 Theobroma cacao
Thecc1EG000763 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3390153-3392152 Theobroma cacao
Thecc1EG000763 2.0kb downstream 2.0kb downstream 4159 true scaffold_1: 3385994-3390152 Theobroma cacao
Thecc1EG000763 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3385994-3387993 Theobroma cacao
Thecc1EG000763 5.0kb upstream 5.0kb upstream 7159 true scaffold_1: 3387994-3395152 Theobroma cacao
Thecc1EG000763 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3390153-3395152 Theobroma cacao
Thecc1EG000763 5.0kb downstream 5.0kb downstream 7159 true scaffold_1: 3382994-3390152 Theobroma cacao
Thecc1EG000763 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3382994-3387993 Theobroma cacao
Thecc1EG000763 10.0kb upstream 10.0kb upstream 12159 true scaffold_1: 3387994-3400152 Theobroma cacao
Thecc1EG000763 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3390153-3400152 Theobroma cacao
Thecc1EG000763 10.0kb downstream 10.0kb downstream 12159 true scaffold_1: 3377994-3390152 Theobroma cacao
Thecc1EG000763 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3377994-3387993 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840482 5264 Brassicales-Malvales View MSA
124351001 5266 SBM View MSA
124246973 5268 Malvidae View MSA
124069945 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain