Gene : Thecc1EG000737 T. cacao v1.1

Defline:  (1 of 2) PTHR23201//PTHR23201:SF15 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED PROTEIN 7 Genomic Order:  643
Name:  ? Thecc1EG000737 Secondary Identifier:  ? PAC:27435309

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000737 0.5kb upstream 0.5kb upstream 1025 true scaffold_1: 3244720-3245744 Theobroma cacao
Thecc1EG000737 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3245245-3245744 Theobroma cacao
Thecc1EG000737 0.5kb downstream 0.5kb downstream 1025 true scaffold_1: 3244220-3245244 Theobroma cacao
Thecc1EG000737 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3244220-3244719 Theobroma cacao
Thecc1EG000737 1.0kb upstream 1.0kb upstream 1525 true scaffold_1: 3244720-3246244 Theobroma cacao
Thecc1EG000737 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3245245-3246244 Theobroma cacao
Thecc1EG000737 1.0kb downstream 1.0kb downstream 1525 true scaffold_1: 3243720-3245244 Theobroma cacao
Thecc1EG000737 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3243720-3244719 Theobroma cacao
Thecc1EG000737 2.0kb upstream 2.0kb upstream 2525 true scaffold_1: 3244720-3247244 Theobroma cacao
Thecc1EG000737 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3245245-3247244 Theobroma cacao
Thecc1EG000737 2.0kb downstream 2.0kb downstream 2525 true scaffold_1: 3242720-3245244 Theobroma cacao
Thecc1EG000737 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3242720-3244719 Theobroma cacao
Thecc1EG000737 5.0kb upstream 5.0kb upstream 5525 true scaffold_1: 3244720-3250244 Theobroma cacao
Thecc1EG000737 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3245245-3250244 Theobroma cacao
Thecc1EG000737 5.0kb downstream 5.0kb downstream 5525 true scaffold_1: 3239720-3245244 Theobroma cacao
Thecc1EG000737 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3239720-3244719 Theobroma cacao
Thecc1EG000737 10.0kb upstream 10.0kb upstream 10525 true scaffold_1: 3244720-3255244 Theobroma cacao
Thecc1EG000737 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3245245-3255244 Theobroma cacao
Thecc1EG000737 10.0kb downstream 10.0kb downstream 10525 true scaffold_1: 3234720-3245244 Theobroma cacao
Thecc1EG000737 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3234720-3244719 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840450 5264 Brassicales-Malvales View MSA
124322721 5266 SBM View MSA
124252864 5268 Malvidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain