Gene : Thecc1EG000725 T. cacao v1.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  632
Name:  ? Thecc1EG000725 Secondary Identifier:  ? PAC:27431576
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000725 0.5kb upstream 0.5kb upstream 5148 true scaffold_1: 3197919-3203066 Theobroma cacao
Thecc1EG000725 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3202567-3203066 Theobroma cacao
Thecc1EG000725 0.5kb downstream 0.5kb downstream 5148 true scaffold_1: 3197419-3202566 Theobroma cacao
Thecc1EG000725 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3197419-3197918 Theobroma cacao
Thecc1EG000725 1.0kb upstream 1.0kb upstream 5648 true scaffold_1: 3197919-3203566 Theobroma cacao
Thecc1EG000725 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3202567-3203566 Theobroma cacao
Thecc1EG000725 1.0kb downstream 1.0kb downstream 5648 true scaffold_1: 3196919-3202566 Theobroma cacao
Thecc1EG000725 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3196919-3197918 Theobroma cacao
Thecc1EG000725 2.0kb upstream 2.0kb upstream 6648 true scaffold_1: 3197919-3204566 Theobroma cacao
Thecc1EG000725 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3202567-3204566 Theobroma cacao
Thecc1EG000725 2.0kb downstream 2.0kb downstream 6648 true scaffold_1: 3195919-3202566 Theobroma cacao
Thecc1EG000725 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3195919-3197918 Theobroma cacao
Thecc1EG000725 5.0kb upstream 5.0kb upstream 9648 true scaffold_1: 3197919-3207566 Theobroma cacao
Thecc1EG000725 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3202567-3207566 Theobroma cacao
Thecc1EG000725 5.0kb downstream 5.0kb downstream 9648 true scaffold_1: 3192919-3202566 Theobroma cacao
Thecc1EG000725 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3192919-3197918 Theobroma cacao
Thecc1EG000725 10.0kb upstream 10.0kb upstream 14648 true scaffold_1: 3197919-3212566 Theobroma cacao
Thecc1EG000725 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3202567-3212566 Theobroma cacao
Thecc1EG000725 10.0kb downstream 10.0kb downstream 14648 true scaffold_1: 3187919-3202566 Theobroma cacao
Thecc1EG000725 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3187919-3197918 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825346 5264 Brassicales-Malvales View MSA
124320563 5266 SBM View MSA
124253684 5268 Malvidae View MSA
124069767 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain