Gene : Thecc1EG000685 T. cacao v1.1
Defline:  (1 of 1) PTHR10743:SF1 - PROTEIN RER1C Genomic Order:  596
Name:  ? Thecc1EG000685 Secondary Identifier:  ? PAC:27435456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000685 0.5kb upstream 0.5kb upstream 3459 true scaffold_1: 3004997-3008455 Theobroma cacao
Thecc1EG000685 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3007956-3008455 Theobroma cacao
Thecc1EG000685 0.5kb downstream 0.5kb downstream 3459 true scaffold_1: 3004497-3007955 Theobroma cacao
Thecc1EG000685 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3004497-3004996 Theobroma cacao
Thecc1EG000685 1.0kb upstream 1.0kb upstream 3959 true scaffold_1: 3004997-3008955 Theobroma cacao
Thecc1EG000685 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3007956-3008955 Theobroma cacao
Thecc1EG000685 1.0kb downstream 1.0kb downstream 3959 true scaffold_1: 3003997-3007955 Theobroma cacao
Thecc1EG000685 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3003997-3004996 Theobroma cacao
Thecc1EG000685 2.0kb upstream 2.0kb upstream 4959 true scaffold_1: 3004997-3009955 Theobroma cacao
Thecc1EG000685 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3007956-3009955 Theobroma cacao
Thecc1EG000685 2.0kb downstream 2.0kb downstream 4959 true scaffold_1: 3002997-3007955 Theobroma cacao
Thecc1EG000685 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3002997-3004996 Theobroma cacao
Thecc1EG000685 5.0kb upstream 5.0kb upstream 7959 true scaffold_1: 3004997-3012955 Theobroma cacao
Thecc1EG000685 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3007956-3012955 Theobroma cacao
Thecc1EG000685 5.0kb downstream 5.0kb downstream 7959 true scaffold_1: 2999997-3007955 Theobroma cacao
Thecc1EG000685 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2999997-3004996 Theobroma cacao
Thecc1EG000685 10.0kb upstream 10.0kb upstream 12959 true scaffold_1: 3004997-3017955 Theobroma cacao
Thecc1EG000685 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3007956-3017955 Theobroma cacao
Thecc1EG000685 10.0kb downstream 10.0kb downstream 12959 true scaffold_1: 2994997-3007955 Theobroma cacao
Thecc1EG000685 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2994997-3004996 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836456 5264 Brassicales-Malvales View MSA
124341689 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain