Gene : Thecc1EG000905 T. cacao v1.1
Defline:  (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 Genomic Order:  795
Name:  ? Thecc1EG000905 Secondary Identifier:  ? PAC:27432684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000905 0.5kb upstream 0.5kb upstream 6138 true scaffold_1: 4086055-4092192 Theobroma cacao
Thecc1EG000905 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4086055-4086554 Theobroma cacao
Thecc1EG000905 0.5kb downstream 0.5kb downstream 6138 true scaffold_1: 4086555-4092692 Theobroma cacao
Thecc1EG000905 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4092193-4092692 Theobroma cacao
Thecc1EG000905 1.0kb upstream 1.0kb upstream 6638 true scaffold_1: 4085555-4092192 Theobroma cacao
Thecc1EG000905 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4085555-4086554 Theobroma cacao
Thecc1EG000905 1.0kb downstream 1.0kb downstream 6638 true scaffold_1: 4086555-4093192 Theobroma cacao
Thecc1EG000905 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4092193-4093192 Theobroma cacao
Thecc1EG000905 2.0kb upstream 2.0kb upstream 7638 true scaffold_1: 4084555-4092192 Theobroma cacao
Thecc1EG000905 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4084555-4086554 Theobroma cacao
Thecc1EG000905 2.0kb downstream 2.0kb downstream 7638 true scaffold_1: 4086555-4094192 Theobroma cacao
Thecc1EG000905 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4092193-4094192 Theobroma cacao
Thecc1EG000905 5.0kb upstream 5.0kb upstream 10638 true scaffold_1: 4081555-4092192 Theobroma cacao
Thecc1EG000905 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4081555-4086554 Theobroma cacao
Thecc1EG000905 5.0kb downstream 5.0kb downstream 10638 true scaffold_1: 4086555-4097192 Theobroma cacao
Thecc1EG000905 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4092193-4097192 Theobroma cacao
Thecc1EG000905 10.0kb upstream 10.0kb upstream 15638 true scaffold_1: 4076555-4092192 Theobroma cacao
Thecc1EG000905 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4076555-4086554 Theobroma cacao
Thecc1EG000905 10.0kb downstream 10.0kb downstream 15638 true scaffold_1: 4086555-4102192 Theobroma cacao
Thecc1EG000905 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4092193-4102192 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837135 5264 Brassicales-Malvales View MSA
124347052 5266 SBM View MSA
124246829 5268 Malvidae View MSA
124050521 5270 Rosid View MSA
123743587 5271 Pentapetalae View MSA
122794632 5272 Eudicot View MSA
122048922 5273 Angiosperm View MSA
121348222 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain