Gene : Thecc1EG000878 T. cacao v1.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  771
Name:  ? Thecc1EG000878 Secondary Identifier:  ? PAC:27436232
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000878 0.5kb upstream 0.5kb upstream 5265 true scaffold_1: 3940802-3946066 Theobroma cacao
Thecc1EG000878 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3945567-3946066 Theobroma cacao
Thecc1EG000878 0.5kb downstream 0.5kb downstream 5265 true scaffold_1: 3940302-3945566 Theobroma cacao
Thecc1EG000878 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3940302-3940801 Theobroma cacao
Thecc1EG000878 1.0kb upstream 1.0kb upstream 5765 true scaffold_1: 3940802-3946566 Theobroma cacao
Thecc1EG000878 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3945567-3946566 Theobroma cacao
Thecc1EG000878 1.0kb downstream 1.0kb downstream 5765 true scaffold_1: 3939802-3945566 Theobroma cacao
Thecc1EG000878 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3939802-3940801 Theobroma cacao
Thecc1EG000878 2.0kb upstream 2.0kb upstream 6765 true scaffold_1: 3940802-3947566 Theobroma cacao
Thecc1EG000878 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3945567-3947566 Theobroma cacao
Thecc1EG000878 2.0kb downstream 2.0kb downstream 6765 true scaffold_1: 3938802-3945566 Theobroma cacao
Thecc1EG000878 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3938802-3940801 Theobroma cacao
Thecc1EG000878 5.0kb upstream 5.0kb upstream 9765 true scaffold_1: 3940802-3950566 Theobroma cacao
Thecc1EG000878 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3945567-3950566 Theobroma cacao
Thecc1EG000878 5.0kb downstream 5.0kb downstream 9765 true scaffold_1: 3935802-3945566 Theobroma cacao
Thecc1EG000878 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3935802-3940801 Theobroma cacao
Thecc1EG000878 10.0kb upstream 10.0kb upstream 14765 true scaffold_1: 3940802-3955566 Theobroma cacao
Thecc1EG000878 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3945567-3955566 Theobroma cacao
Thecc1EG000878 10.0kb downstream 10.0kb downstream 14765 true scaffold_1: 3930802-3945566 Theobroma cacao
Thecc1EG000878 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3930802-3940801 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827202 5264 Brassicales-Malvales View MSA
124348055 5266 SBM View MSA
124247352 5268 Malvidae View MSA
124074418 5270 Rosid View MSA
123628573 5271 Pentapetalae View MSA
122662840 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain