Gene : Thecc1EG000852 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  747
Name:  ? Thecc1EG000852 Secondary Identifier:  ? PAC:27431289
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000852 0.5kb upstream 0.5kb upstream 4578 true scaffold_1: 3783436-3788013 Theobroma cacao
Thecc1EG000852 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3783436-3783935 Theobroma cacao
Thecc1EG000852 0.5kb downstream 0.5kb downstream 4578 true scaffold_1: 3783936-3788513 Theobroma cacao
Thecc1EG000852 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3788014-3788513 Theobroma cacao
Thecc1EG000852 1.0kb upstream 1.0kb upstream 5078 true scaffold_1: 3782936-3788013 Theobroma cacao
Thecc1EG000852 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3782936-3783935 Theobroma cacao
Thecc1EG000852 1.0kb downstream 1.0kb downstream 5078 true scaffold_1: 3783936-3789013 Theobroma cacao
Thecc1EG000852 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3788014-3789013 Theobroma cacao
Thecc1EG000852 2.0kb upstream 2.0kb upstream 6078 true scaffold_1: 3781936-3788013 Theobroma cacao
Thecc1EG000852 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3781936-3783935 Theobroma cacao
Thecc1EG000852 2.0kb downstream 2.0kb downstream 6078 true scaffold_1: 3783936-3790013 Theobroma cacao
Thecc1EG000852 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3788014-3790013 Theobroma cacao
Thecc1EG000852 5.0kb upstream 5.0kb upstream 9078 true scaffold_1: 3778936-3788013 Theobroma cacao
Thecc1EG000852 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3778936-3783935 Theobroma cacao
Thecc1EG000852 5.0kb downstream 5.0kb downstream 9078 true scaffold_1: 3783936-3793013 Theobroma cacao
Thecc1EG000852 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3788014-3793013 Theobroma cacao
Thecc1EG000852 10.0kb upstream 10.0kb upstream 14078 true scaffold_1: 3773936-3788013 Theobroma cacao
Thecc1EG000852 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3773936-3783935 Theobroma cacao
Thecc1EG000852 10.0kb downstream 10.0kb downstream 14078 true scaffold_1: 3783936-3798013 Theobroma cacao
Thecc1EG000852 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3788014-3798013 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837824 5264 Brassicales-Malvales View MSA
124341262 5266 SBM View MSA
124239677 5268 Malvidae View MSA
124064140 5270 Rosid View MSA
123738783 5271 Pentapetalae View MSA
122791197 5272 Eudicot View MSA
122048110 5273 Angiosperm View MSA
121310850 5274 Embryophyte View MSA
123348235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain