Gene : Thecc1EG000844 T. cacao v1.1

Defline:  (1 of 2) PTHR32467//PTHR32467:SF11 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT Genomic Order:  740
Name:  ? Thecc1EG000844 Secondary Identifier:  ? PAC:27435320

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000844 0.5kb upstream 0.5kb upstream 5992 true scaffold_1: 3743364-3749355 Theobroma cacao
Thecc1EG000844 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3743364-3743863 Theobroma cacao
Thecc1EG000844 0.5kb downstream 0.5kb downstream 5992 true scaffold_1: 3743864-3749855 Theobroma cacao
Thecc1EG000844 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3749356-3749855 Theobroma cacao
Thecc1EG000844 1.0kb upstream 1.0kb upstream 6492 true scaffold_1: 3742864-3749355 Theobroma cacao
Thecc1EG000844 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3742864-3743863 Theobroma cacao
Thecc1EG000844 1.0kb downstream 1.0kb downstream 6492 true scaffold_1: 3743864-3750355 Theobroma cacao
Thecc1EG000844 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3749356-3750355 Theobroma cacao
Thecc1EG000844 2.0kb upstream 2.0kb upstream 7492 true scaffold_1: 3741864-3749355 Theobroma cacao
Thecc1EG000844 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3741864-3743863 Theobroma cacao
Thecc1EG000844 2.0kb downstream 2.0kb downstream 7492 true scaffold_1: 3743864-3751355 Theobroma cacao
Thecc1EG000844 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3749356-3751355 Theobroma cacao
Thecc1EG000844 5.0kb upstream 5.0kb upstream 10492 true scaffold_1: 3738864-3749355 Theobroma cacao
Thecc1EG000844 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3738864-3743863 Theobroma cacao
Thecc1EG000844 5.0kb downstream 5.0kb downstream 10492 true scaffold_1: 3743864-3754355 Theobroma cacao
Thecc1EG000844 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3749356-3754355 Theobroma cacao
Thecc1EG000844 10.0kb upstream 10.0kb upstream 15492 true scaffold_1: 3733864-3749355 Theobroma cacao
Thecc1EG000844 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3733864-3743863 Theobroma cacao
Thecc1EG000844 10.0kb downstream 10.0kb downstream 15492 true scaffold_1: 3743864-3759355 Theobroma cacao
Thecc1EG000844 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3749356-3759355 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837128 5264 Brassicales-Malvales View MSA
124337189 5266 SBM View MSA
124251778 5268 Malvidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain