Gene : Thecc1EG000838 T. cacao v1.1
Defline:  (1 of 1) PTHR31602:SF2 - GROWTH-REGULATING FACTOR 1-RELATED Genomic Order:  735
Name:  ? Thecc1EG000838 Secondary Identifier:  ? PAC:27437309
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000838 0.5kb upstream 0.5kb upstream 4795 true scaffold_1: 3717105-3721899 Theobroma cacao
Thecc1EG000838 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3721400-3721899 Theobroma cacao
Thecc1EG000838 0.5kb downstream 0.5kb downstream 4795 true scaffold_1: 3716605-3721399 Theobroma cacao
Thecc1EG000838 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3716605-3717104 Theobroma cacao
Thecc1EG000838 1.0kb upstream 1.0kb upstream 5295 true scaffold_1: 3717105-3722399 Theobroma cacao
Thecc1EG000838 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3721400-3722399 Theobroma cacao
Thecc1EG000838 1.0kb downstream 1.0kb downstream 5295 true scaffold_1: 3716105-3721399 Theobroma cacao
Thecc1EG000838 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3716105-3717104 Theobroma cacao
Thecc1EG000838 2.0kb upstream 2.0kb upstream 6295 true scaffold_1: 3717105-3723399 Theobroma cacao
Thecc1EG000838 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3721400-3723399 Theobroma cacao
Thecc1EG000838 2.0kb downstream 2.0kb downstream 6295 true scaffold_1: 3715105-3721399 Theobroma cacao
Thecc1EG000838 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3715105-3717104 Theobroma cacao
Thecc1EG000838 5.0kb upstream 5.0kb upstream 9295 true scaffold_1: 3717105-3726399 Theobroma cacao
Thecc1EG000838 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3721400-3726399 Theobroma cacao
Thecc1EG000838 5.0kb downstream 5.0kb downstream 9295 true scaffold_1: 3712105-3721399 Theobroma cacao
Thecc1EG000838 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3712105-3717104 Theobroma cacao
Thecc1EG000838 10.0kb upstream 10.0kb upstream 14295 true scaffold_1: 3717105-3731399 Theobroma cacao
Thecc1EG000838 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3721400-3731399 Theobroma cacao
Thecc1EG000838 10.0kb downstream 10.0kb downstream 14295 true scaffold_1: 3707105-3721399 Theobroma cacao
Thecc1EG000838 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3707105-3717104 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837780 5264 Brassicales-Malvales View MSA
124346145 5266 SBM View MSA
124253691 5268 Malvidae View MSA
124070483 5270 Rosid View MSA
123751333 5271 Pentapetalae View MSA
122792391 5272 Eudicot View MSA
122044407 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain