Gene : Thecc1EG000817 T. cacao v1.1
Defline:  (1 of 1) PTHR31311//PTHR31311:SF3 - FAMILY NOT NAMED // GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  715
Name:  ? Thecc1EG000817 Secondary Identifier:  ? PAC:27434282
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000817 0.5kb upstream 0.5kb upstream 3851 true scaffold_1: 3628083-3631933 Theobroma cacao
Thecc1EG000817 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3628083-3628582 Theobroma cacao
Thecc1EG000817 0.5kb downstream 0.5kb downstream 3851 true scaffold_1: 3628583-3632433 Theobroma cacao
Thecc1EG000817 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3631934-3632433 Theobroma cacao
Thecc1EG000817 1.0kb upstream 1.0kb upstream 4351 true scaffold_1: 3627583-3631933 Theobroma cacao
Thecc1EG000817 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3627583-3628582 Theobroma cacao
Thecc1EG000817 1.0kb downstream 1.0kb downstream 4351 true scaffold_1: 3628583-3632933 Theobroma cacao
Thecc1EG000817 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3631934-3632933 Theobroma cacao
Thecc1EG000817 2.0kb upstream 2.0kb upstream 5351 true scaffold_1: 3626583-3631933 Theobroma cacao
Thecc1EG000817 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3626583-3628582 Theobroma cacao
Thecc1EG000817 2.0kb downstream 2.0kb downstream 5351 true scaffold_1: 3628583-3633933 Theobroma cacao
Thecc1EG000817 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3631934-3633933 Theobroma cacao
Thecc1EG000817 5.0kb upstream 5.0kb upstream 8351 true scaffold_1: 3623583-3631933 Theobroma cacao
Thecc1EG000817 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3623583-3628582 Theobroma cacao
Thecc1EG000817 5.0kb downstream 5.0kb downstream 8351 true scaffold_1: 3628583-3636933 Theobroma cacao
Thecc1EG000817 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3631934-3636933 Theobroma cacao
Thecc1EG000817 10.0kb upstream 10.0kb upstream 13351 true scaffold_1: 3618583-3631933 Theobroma cacao
Thecc1EG000817 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3618583-3628582 Theobroma cacao
Thecc1EG000817 10.0kb downstream 10.0kb downstream 13351 true scaffold_1: 3628583-3641933 Theobroma cacao
Thecc1EG000817 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3631934-3641933 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
123827372 5264 Brassicales-Malvales View MSA
124337497 5266 SBM View MSA
124238551 5268 Malvidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain