Gene : Thecc1EG000805 T. cacao v1.1
Defline:  (1 of 8) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  703
Name:  ? Thecc1EG000805 Secondary Identifier:  ? PAC:27433216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000805 0.5kb upstream 0.5kb upstream 6324 true scaffold_1: 3569493-3575816 Theobroma cacao
Thecc1EG000805 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3569493-3569992 Theobroma cacao
Thecc1EG000805 0.5kb downstream 0.5kb downstream 6324 true scaffold_1: 3569993-3576316 Theobroma cacao
Thecc1EG000805 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3575817-3576316 Theobroma cacao
Thecc1EG000805 1.0kb upstream 1.0kb upstream 6824 true scaffold_1: 3568993-3575816 Theobroma cacao
Thecc1EG000805 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3568993-3569992 Theobroma cacao
Thecc1EG000805 1.0kb downstream 1.0kb downstream 6824 true scaffold_1: 3569993-3576816 Theobroma cacao
Thecc1EG000805 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3575817-3576816 Theobroma cacao
Thecc1EG000805 2.0kb upstream 2.0kb upstream 7824 true scaffold_1: 3567993-3575816 Theobroma cacao
Thecc1EG000805 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3567993-3569992 Theobroma cacao
Thecc1EG000805 2.0kb downstream 2.0kb downstream 7824 true scaffold_1: 3569993-3577816 Theobroma cacao
Thecc1EG000805 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3575817-3577816 Theobroma cacao
Thecc1EG000805 5.0kb upstream 5.0kb upstream 10824 true scaffold_1: 3564993-3575816 Theobroma cacao
Thecc1EG000805 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3564993-3569992 Theobroma cacao
Thecc1EG000805 5.0kb downstream 5.0kb downstream 10824 true scaffold_1: 3569993-3580816 Theobroma cacao
Thecc1EG000805 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3575817-3580816 Theobroma cacao
Thecc1EG000805 10.0kb upstream 10.0kb upstream 15824 true scaffold_1: 3559993-3575816 Theobroma cacao
Thecc1EG000805 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3559993-3569992 Theobroma cacao
Thecc1EG000805 10.0kb downstream 10.0kb downstream 15824 true scaffold_1: 3569993-3585816 Theobroma cacao
Thecc1EG000805 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3575817-3585816 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827716 5264 Brassicales-Malvales View MSA
124346504 5266 SBM View MSA
124241029 5268 Malvidae View MSA
124050394 5270 Rosid View MSA
123748612 5271 Pentapetalae View MSA
122791093 5272 Eudicot View MSA
122046985 5273 Angiosperm View MSA
121347235 5274 Embryophyte View MSA
123380515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain