Gene : Thecc1EG000803 T. cacao v1.1

Defline:  Uncharacterized protein (47%P) Genomic Order:  701
Name:  ? Thecc1EG000803 Secondary Identifier:  ? PAC:27434822

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000803 0.5kb upstream 0.5kb upstream 4089 true scaffold_1: 3560838-3564926 Theobroma cacao
Thecc1EG000803 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3564427-3564926 Theobroma cacao
Thecc1EG000803 0.5kb downstream 0.5kb downstream 4089 true scaffold_1: 3560338-3564426 Theobroma cacao
Thecc1EG000803 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3560338-3560837 Theobroma cacao
Thecc1EG000803 1.0kb upstream 1.0kb upstream 4589 true scaffold_1: 3560838-3565426 Theobroma cacao
Thecc1EG000803 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3564427-3565426 Theobroma cacao
Thecc1EG000803 1.0kb downstream 1.0kb downstream 4589 true scaffold_1: 3559838-3564426 Theobroma cacao
Thecc1EG000803 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3559838-3560837 Theobroma cacao
Thecc1EG000803 2.0kb upstream 2.0kb upstream 5589 true scaffold_1: 3560838-3566426 Theobroma cacao
Thecc1EG000803 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3564427-3566426 Theobroma cacao
Thecc1EG000803 2.0kb downstream 2.0kb downstream 5589 true scaffold_1: 3558838-3564426 Theobroma cacao
Thecc1EG000803 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3558838-3560837 Theobroma cacao
Thecc1EG000803 5.0kb upstream 5.0kb upstream 8589 true scaffold_1: 3560838-3569426 Theobroma cacao
Thecc1EG000803 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3564427-3569426 Theobroma cacao
Thecc1EG000803 5.0kb downstream 5.0kb downstream 8589 true scaffold_1: 3555838-3564426 Theobroma cacao
Thecc1EG000803 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3555838-3560837 Theobroma cacao
Thecc1EG000803 10.0kb upstream 10.0kb upstream 13589 true scaffold_1: 3560838-3574426 Theobroma cacao
Thecc1EG000803 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3564427-3574426 Theobroma cacao
Thecc1EG000803 10.0kb downstream 10.0kb downstream 13589 true scaffold_1: 3550838-3564426 Theobroma cacao
Thecc1EG000803 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3550838-3560837 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041270 5273 Angiosperm View MSA
123840188 5264 Brassicales-Malvales View MSA
124343462 5266 SBM View MSA
124250428 5268 Malvidae View MSA
124069692 5270 Rosid View MSA
123749330 5271 Pentapetalae View MSA
122794611 5272 Eudicot View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain