Gene : Thecc1EG000789 T. cacao v1.1
Defline:  (1 of 2) PTHR24093//PTHR24093:SF262 - FAMILY NOT NAMED // CALCIUM-TRANSPORTING ATPASE 2, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  690
Name:  ? Thecc1EG000789 Secondary Identifier:  ? PAC:27435897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000789 0.5kb upstream 0.5kb upstream 7578 true scaffold_1: 3502621-3510198 Theobroma cacao
Thecc1EG000789 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3509699-3510198 Theobroma cacao
Thecc1EG000789 0.5kb downstream 0.5kb downstream 7578 true scaffold_1: 3502121-3509698 Theobroma cacao
Thecc1EG000789 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3502121-3502620 Theobroma cacao
Thecc1EG000789 1.0kb upstream 1.0kb upstream 8078 true scaffold_1: 3502621-3510698 Theobroma cacao
Thecc1EG000789 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3509699-3510698 Theobroma cacao
Thecc1EG000789 1.0kb downstream 1.0kb downstream 8078 true scaffold_1: 3501621-3509698 Theobroma cacao
Thecc1EG000789 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3501621-3502620 Theobroma cacao
Thecc1EG000789 2.0kb upstream 2.0kb upstream 9078 true scaffold_1: 3502621-3511698 Theobroma cacao
Thecc1EG000789 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3509699-3511698 Theobroma cacao
Thecc1EG000789 2.0kb downstream 2.0kb downstream 9078 true scaffold_1: 3500621-3509698 Theobroma cacao
Thecc1EG000789 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3500621-3502620 Theobroma cacao
Thecc1EG000789 5.0kb upstream 5.0kb upstream 12078 true scaffold_1: 3502621-3514698 Theobroma cacao
Thecc1EG000789 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3509699-3514698 Theobroma cacao
Thecc1EG000789 5.0kb downstream 5.0kb downstream 12078 true scaffold_1: 3497621-3509698 Theobroma cacao
Thecc1EG000789 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3497621-3502620 Theobroma cacao
Thecc1EG000789 10.0kb upstream 10.0kb upstream 17078 true scaffold_1: 3502621-3519698 Theobroma cacao
Thecc1EG000789 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3509699-3519698 Theobroma cacao
Thecc1EG000789 10.0kb downstream 10.0kb downstream 17078 true scaffold_1: 3492621-3509698 Theobroma cacao
Thecc1EG000789 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3492621-3502620 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839604 5264 Brassicales-Malvales View MSA
124343745 5266 SBM View MSA
124238612 5268 Malvidae View MSA
124067452 5270 Rosid View MSA
123746765 5271 Pentapetalae View MSA
122788343 5272 Eudicot View MSA
122047165 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain