Gene : Thecc1EG000792 T. cacao v1.1

Defline:  (1 of 2) K02898 - large subunit ribosomal protein L26e (RP-L26e, RPL26) Genomic Order:  692
Name:  ? Thecc1EG000792 Secondary Identifier:  ? PAC:27435934

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000792 0.5kb upstream 0.5kb upstream 1215 true scaffold_1: 3517112-3518326 Theobroma cacao
Thecc1EG000792 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3517827-3518326 Theobroma cacao
Thecc1EG000792 0.5kb downstream 0.5kb downstream 1215 true scaffold_1: 3516612-3517826 Theobroma cacao
Thecc1EG000792 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3516612-3517111 Theobroma cacao
Thecc1EG000792 1.0kb upstream 1.0kb upstream 1715 true scaffold_1: 3517112-3518826 Theobroma cacao
Thecc1EG000792 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3517827-3518826 Theobroma cacao
Thecc1EG000792 1.0kb downstream 1.0kb downstream 1715 true scaffold_1: 3516112-3517826 Theobroma cacao
Thecc1EG000792 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3516112-3517111 Theobroma cacao
Thecc1EG000792 2.0kb upstream 2.0kb upstream 2715 true scaffold_1: 3517112-3519826 Theobroma cacao
Thecc1EG000792 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3517827-3519826 Theobroma cacao
Thecc1EG000792 2.0kb downstream 2.0kb downstream 2715 true scaffold_1: 3515112-3517826 Theobroma cacao
Thecc1EG000792 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3515112-3517111 Theobroma cacao
Thecc1EG000792 5.0kb upstream 5.0kb upstream 5715 true scaffold_1: 3517112-3522826 Theobroma cacao
Thecc1EG000792 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3517827-3522826 Theobroma cacao
Thecc1EG000792 5.0kb downstream 5.0kb downstream 5715 true scaffold_1: 3512112-3517826 Theobroma cacao
Thecc1EG000792 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3512112-3517111 Theobroma cacao
Thecc1EG000792 10.0kb upstream 10.0kb upstream 10715 true scaffold_1: 3517112-3527826 Theobroma cacao
Thecc1EG000792 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3517827-3527826 Theobroma cacao
Thecc1EG000792 10.0kb downstream 10.0kb downstream 10715 true scaffold_1: 3507112-3517826 Theobroma cacao
Thecc1EG000792 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3507112-3517111 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837607 5264 Brassicales-Malvales View MSA
124338276 5266 SBM View MSA
124241858 5268 Malvidae View MSA
124063480 5270 Rosid View MSA
123750326 5271 Pentapetalae View MSA
122794784 5272 Eudicot View MSA
122049304 5273 Angiosperm View MSA
121349840 5274 Embryophyte View MSA
123426280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain