Gene : Thecc1EG001041 T. cacao v1.1

Defline:  (1 of 5) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  918
Name:  ? Thecc1EG001041 Secondary Identifier:  ? PAC:27436607

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001041 0.5kb upstream 0.5kb upstream 1078 true scaffold_1: 4936469-4937546 Theobroma cacao
Thecc1EG001041 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4936469-4936968 Theobroma cacao
Thecc1EG001041 0.5kb downstream 0.5kb downstream 1078 true scaffold_1: 4936969-4938046 Theobroma cacao
Thecc1EG001041 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4937547-4938046 Theobroma cacao
Thecc1EG001041 1.0kb upstream 1.0kb upstream 1578 true scaffold_1: 4935969-4937546 Theobroma cacao
Thecc1EG001041 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4935969-4936968 Theobroma cacao
Thecc1EG001041 1.0kb downstream 1.0kb downstream 1578 true scaffold_1: 4936969-4938546 Theobroma cacao
Thecc1EG001041 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4937547-4938546 Theobroma cacao
Thecc1EG001041 2.0kb upstream 2.0kb upstream 2578 true scaffold_1: 4934969-4937546 Theobroma cacao
Thecc1EG001041 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4934969-4936968 Theobroma cacao
Thecc1EG001041 2.0kb downstream 2.0kb downstream 2578 true scaffold_1: 4936969-4939546 Theobroma cacao
Thecc1EG001041 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4937547-4939546 Theobroma cacao
Thecc1EG001041 5.0kb upstream 5.0kb upstream 5578 true scaffold_1: 4931969-4937546 Theobroma cacao
Thecc1EG001041 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4931969-4936968 Theobroma cacao
Thecc1EG001041 5.0kb downstream 5.0kb downstream 5578 true scaffold_1: 4936969-4942546 Theobroma cacao
Thecc1EG001041 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4937547-4942546 Theobroma cacao
Thecc1EG001041 10.0kb upstream 10.0kb upstream 10578 true scaffold_1: 4926969-4937546 Theobroma cacao
Thecc1EG001041 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4926969-4936968 Theobroma cacao
Thecc1EG001041 10.0kb downstream 10.0kb downstream 10578 true scaffold_1: 4936969-4947546 Theobroma cacao
Thecc1EG001041 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4937547-4947546 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829426 5264 Brassicales-Malvales View MSA
124351646 5266 SBM View MSA
124253514 5268 Malvidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain