Gene : Thecc1EG000992 T. cacao v1.1
Defline:  (1 of 3) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  875
Name:  ? Thecc1EG000992 Secondary Identifier:  ? PAC:27436023
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000992 0.5kb upstream 0.5kb upstream 6826 true scaffold_1: 4597388-4604213 Theobroma cacao
Thecc1EG000992 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4603714-4604213 Theobroma cacao
Thecc1EG000992 0.5kb downstream 0.5kb downstream 6826 true scaffold_1: 4596888-4603713 Theobroma cacao
Thecc1EG000992 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4596888-4597387 Theobroma cacao
Thecc1EG000992 1.0kb upstream 1.0kb upstream 7326 true scaffold_1: 4597388-4604713 Theobroma cacao
Thecc1EG000992 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4603714-4604713 Theobroma cacao
Thecc1EG000992 1.0kb downstream 1.0kb downstream 7326 true scaffold_1: 4596388-4603713 Theobroma cacao
Thecc1EG000992 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4596388-4597387 Theobroma cacao
Thecc1EG000992 2.0kb upstream 2.0kb upstream 8326 true scaffold_1: 4597388-4605713 Theobroma cacao
Thecc1EG000992 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4603714-4605713 Theobroma cacao
Thecc1EG000992 2.0kb downstream 2.0kb downstream 8326 true scaffold_1: 4595388-4603713 Theobroma cacao
Thecc1EG000992 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4595388-4597387 Theobroma cacao
Thecc1EG000992 5.0kb upstream 5.0kb upstream 11326 true scaffold_1: 4597388-4608713 Theobroma cacao
Thecc1EG000992 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4603714-4608713 Theobroma cacao
Thecc1EG000992 5.0kb downstream 5.0kb downstream 11326 true scaffold_1: 4592388-4603713 Theobroma cacao
Thecc1EG000992 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4592388-4597387 Theobroma cacao
Thecc1EG000992 10.0kb upstream 10.0kb upstream 16326 true scaffold_1: 4597388-4613713 Theobroma cacao
Thecc1EG000992 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4603714-4613713 Theobroma cacao
Thecc1EG000992 10.0kb downstream 10.0kb downstream 16326 true scaffold_1: 4587388-4603713 Theobroma cacao
Thecc1EG000992 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4587388-4597387 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827558 5264 Brassicales-Malvales View MSA
124343658 5266 SBM View MSA
124242097 5268 Malvidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain