Gene : Thecc1EG000962 T. cacao v1.1
Defline:  (1 of 4) PTHR11062//PTHR11062:SF63 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  846
Name:  ? Thecc1EG000962 Secondary Identifier:  ? PAC:27437317
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000962 0.5kb upstream 0.5kb upstream 3862 true scaffold_1: 4427360-4431221 Theobroma cacao
Thecc1EG000962 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4427360-4427859 Theobroma cacao
Thecc1EG000962 0.5kb downstream 0.5kb downstream 3862 true scaffold_1: 4427860-4431721 Theobroma cacao
Thecc1EG000962 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4431222-4431721 Theobroma cacao
Thecc1EG000962 1.0kb upstream 1.0kb upstream 4362 true scaffold_1: 4426860-4431221 Theobroma cacao
Thecc1EG000962 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4426860-4427859 Theobroma cacao
Thecc1EG000962 1.0kb downstream 1.0kb downstream 4362 true scaffold_1: 4427860-4432221 Theobroma cacao
Thecc1EG000962 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4431222-4432221 Theobroma cacao
Thecc1EG000962 2.0kb upstream 2.0kb upstream 5362 true scaffold_1: 4425860-4431221 Theobroma cacao
Thecc1EG000962 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4425860-4427859 Theobroma cacao
Thecc1EG000962 2.0kb downstream 2.0kb downstream 5362 true scaffold_1: 4427860-4433221 Theobroma cacao
Thecc1EG000962 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4431222-4433221 Theobroma cacao
Thecc1EG000962 5.0kb upstream 5.0kb upstream 8362 true scaffold_1: 4422860-4431221 Theobroma cacao
Thecc1EG000962 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4422860-4427859 Theobroma cacao
Thecc1EG000962 5.0kb downstream 5.0kb downstream 8362 true scaffold_1: 4427860-4436221 Theobroma cacao
Thecc1EG000962 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4431222-4436221 Theobroma cacao
Thecc1EG000962 10.0kb upstream 10.0kb upstream 13362 true scaffold_1: 4417860-4431221 Theobroma cacao
Thecc1EG000962 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4417860-4427859 Theobroma cacao
Thecc1EG000962 10.0kb downstream 10.0kb downstream 13362 true scaffold_1: 4427860-4441221 Theobroma cacao
Thecc1EG000962 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4431222-4441221 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834330 5264 Brassicales-Malvales View MSA
124350181 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain