Gene : Thecc1EG000952 T. cacao v1.1
Defline:  (1 of 5) PTHR11695:SF497 - CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED Genomic Order:  838
Name:  ? Thecc1EG000952 Secondary Identifier:  ? PAC:27431393
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000952 0.5kb upstream 0.5kb upstream 12215 true scaffold_1: 4358222-4370436 Theobroma cacao
Thecc1EG000952 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4358222-4358721 Theobroma cacao
Thecc1EG000952 0.5kb downstream 0.5kb downstream 12215 true scaffold_1: 4358722-4370936 Theobroma cacao
Thecc1EG000952 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4370437-4370936 Theobroma cacao
Thecc1EG000952 1.0kb upstream 1.0kb upstream 12715 true scaffold_1: 4357722-4370436 Theobroma cacao
Thecc1EG000952 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4357722-4358721 Theobroma cacao
Thecc1EG000952 1.0kb downstream 1.0kb downstream 12715 true scaffold_1: 4358722-4371436 Theobroma cacao
Thecc1EG000952 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4370437-4371436 Theobroma cacao
Thecc1EG000952 2.0kb upstream 2.0kb upstream 13715 true scaffold_1: 4356722-4370436 Theobroma cacao
Thecc1EG000952 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4356722-4358721 Theobroma cacao
Thecc1EG000952 2.0kb downstream 2.0kb downstream 13715 true scaffold_1: 4358722-4372436 Theobroma cacao
Thecc1EG000952 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4370437-4372436 Theobroma cacao
Thecc1EG000952 5.0kb upstream 5.0kb upstream 16715 true scaffold_1: 4353722-4370436 Theobroma cacao
Thecc1EG000952 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4353722-4358721 Theobroma cacao
Thecc1EG000952 5.0kb downstream 5.0kb downstream 16715 true scaffold_1: 4358722-4375436 Theobroma cacao
Thecc1EG000952 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4370437-4375436 Theobroma cacao
Thecc1EG000952 10.0kb upstream 10.0kb upstream 21715 true scaffold_1: 4348722-4370436 Theobroma cacao
Thecc1EG000952 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4348722-4358721 Theobroma cacao
Thecc1EG000952 10.0kb downstream 10.0kb downstream 21715 true scaffold_1: 4358722-4380436 Theobroma cacao
Thecc1EG000952 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4370437-4380436 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823712 5264 Brassicales-Malvales View MSA
124351735 5266 SBM View MSA
124249969 5268 Malvidae View MSA
124074336 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain